RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PLATP00750 562 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 CHRM4P08173 479 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 PRKAA2P54646 552 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 PLTPP55058 493 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 PROK1P58294 105 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 GALK2Q01415 458 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 C2orf68Q2NKX9 166 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 HFEQ30201 348 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 SPDYE7PQ495Y7 208 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 DCAKDQ8WVC6 231 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 GTF3AQ92664 365 aaKnown RBP12.38□□□□□ -0.43
VAMP4-202ENST00000367740 CHIAQ9BZP6 476 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 C1orf109Q9NX04 203 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ADPRHL2Q9NX46 363 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 TMEM216Q9P0N5 145 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ASH2LQ9UBL3 628 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 IGLV3-9A0A075B6K5 115 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 C5orf63A6NC05 138 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 ZNF99A8MXY4 864 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-202ENST00000367740 VAMP5O95183 116 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 CD79AP11912 226 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 ATP5F1P24539 256 aaPredicted RBP12.37□□□□□ -0.43
VAMP4-202ENST00000367740 MAP2K6P52564 334 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 PIGFQ07326 219 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 PDCD1Q15116 288 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 TYW3Q6IPR3 259 aaKnown RBP12.37□□□□□ -0.43
VAMP4-202ENST00000367740 ZDHHC24Q6UX98 284 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 HMGN2P46Q86SG4 172 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 CMIPQ8IY22 773 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 OR7A2PQ8NGA2 310 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 OR52E2Q8NGJ4 325 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 OR2T11Q8NH01 316 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 SNX33Q8WV41 574 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 OR5P2Q8WZ92 322 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 PRDM13Q9H4Q3 707 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 MARCH7Q9H992 704 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 SAP30LQ9HAJ7 183 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 RCE1Q9Y256 329 aa12.37□□□□□ -0.43
VAMP4-202ENST00000367740 TPD52L2O43399 206 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 FRS3O43559 492 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 SCN2BO60939 215 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 SLC43A1O75387 559 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 C6orf47O95873 294 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 LAMP1P11279 417 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 MAKP20794 623 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 CLDN17P56750 224 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 KLF3P57682 345 aaPredicted RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 SEC61A1P61619 476 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 ETF1P62495 437 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 DEFB112Q30KQ8 113 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 RGS7BPQ6MZT1 257 aaPredicted RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 R3HCC1LQ7Z5L2 792 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 MGARPQ8TDB4 240 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 OIT3Q8WWZ8 545 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
VAMP4-202ENST00000367740 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 ZG16BQ96DA0 208 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 SLC6A13Q9NSD5 602 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
VAMP4-202ENST00000367740 TRAV40A0A0B4J280 105 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 RAD51CO43502 376 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 INHBAP08476 426 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 PTDSS1P48651 473 aaKnown RBP12.35□□□□□ -0.43
VAMP4-202ENST00000367740 FUT5Q11128 374 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 HNRNPA0Q13151 305 aaKnown RBP12.35□□□□□ -0.43
VAMP4-202ENST00000367740 TSTQ16762 297 aaKnown RBP12.35□□□□□ -0.43
VAMP4-202ENST00000367740 RFTN2Q52LD8 501 aaPredicted RBP12.35□□□□□ -0.43
VAMP4-202ENST00000367740 LIPMQ5VYY2 423 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 C16orf62Q7Z3J2 963 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 SLC22A9Q8IVM8 553 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 KDM8Q8N371 416 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 CCL17Q92583 94 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 ELMOD3Q96FG2 381 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 KRTAP17-1Q9BYP8 105 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 NPHS2Q9NP85 383 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 GPR160Q9UJ42 338 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 WDR45Q9Y484 360 aa12.35□□□□□ -0.43
VAMP4-202ENST00000367740 DUXAA6NLW8 204 aa12.34□□□□□ -0.43
VAMP4-202ENST00000367740 A8MXK9 166 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms