RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PAGE3Q5JUK9 113 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ENTPD8Q5MY95 495 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR4N2Q8NGD1 307 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PROKR1Q8TCW9 393 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FIZ1Q96SL8 496 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HSPB8Q9UJY1 196 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CFDP00746 253 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF20P17024 532 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A1P53007 311 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A11Q02978 314 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CAMK2BQ13554 666 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TLR9Q9NR96 1032 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TNFSF18Q9UNG2 199 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 KDM4FA0A1W2PPD8 638 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 JMJD6Q6NYC1 403 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PRSS42Q7Z5A4 293 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR5L2Q8NGL0 311 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 C14orf79Q96F83 325 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CASZ1Q86V15 1759 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PLRG1O43660 514 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 STK17BO94768 372 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ATP5G1P05496 136 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RPL13AP40429 203 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ATP5G3P48201 142 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ATP5G2Q06055 141 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 BCL2L1Q07817 233 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR4N5Q8IXE1 308 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GINS3Q9BRX5 216 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ALG8Q9BVK2 526 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 A8MVM7 634 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FOLR1P15328 257 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LIMS1P48059 325 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FOXK2Q01167 660 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ARRDC4Q8NCT1 418 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 NEURL3Q96EH8 262 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MVB12AQ96EY5 273 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MRGPRX1Q96LB2 322 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF300Q96RE9 604 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 NELL2Q99435 816 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 WASHC3Q9Y3C0 194 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LIMS3P0CW19 117 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LIMS4P0CW20 117 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RPL7AP62424 266 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SMAD4Q13485 552 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ARHGAP40Q5TG30 622 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR1L6Q8NGR2 347 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SLC52A3Q9NQ40 469 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PLEKHJ1Q9NW61 149 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 B4GALT7Q9UBV7 327 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZFP37Q9Y6Q3 630 aaPredicted RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RNGTTO60942 597 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 AKR1C4P17516 323 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RPS15AP62244 130 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 IER5LQ5T953 404 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 C15orf39Q6ZRI6 1047 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 P2RY11Q96G91 374 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FKBP11Q9NYL4 201 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TBC1D3EA0A087X179 549 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TRAV1-1A0A0B4J248 108 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RAB28P51157 221 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ERVFRD-1P60508 538 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CXCL9Q07325 125 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR7E24Q6IFN5 339 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PWWP2BQ6NUJ5 590 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF439Q8NDP4 499 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR5M9Q8NGP3 310 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TSLPQ969D9 159 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GPR137Q96N19 417 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SRRQ9GZT4 340 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CLDN34H7C241 214 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 FFAR2O15552 330 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 XKR7Q5GH72 579 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 INTS12Q96CB8 462 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 MSLNLQ96KJ4 702 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ENKD1Q9H0I2 346 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 C14orf119Q9NWQ9 140 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TRAV8-7A0A075B6U6 113 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RPL35P42766 123 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 SELENOWP63302 87 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 NHLH2Q02577 135 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR1E3Q8WZA6 343 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GAL3ST4Q96RP7 486 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 PARP11Q9NR21 331 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 IGKV6D-41A0A0C4DH26 115 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 ENPP3O14638 875 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 DLX3O60479 287 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 CTNSO60931 367 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 OR10J4P0C629 311 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HOXC12P31275 282 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 GRB7Q14451 532 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 LYSMD3Q7Z3D4 306 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 TCFL5Q9UL49 500 aa3.49□□□□□ -1.85
SYNE1-207ENST00000367255 HBEGFQ99075 208 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MRPL45Q9BRJ2 306 aaKnown RBP3.48□□□□□ -1.85
SYNE1-207ENST00000367255 FZD8Q9H461 694 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 C22orf46C9J442 243 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 MAFKO60675 156 aa3.48□□□□□ -1.85
SYNE1-207ENST00000367255 PLATP00750 562 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms