RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 KIAA1549LQ6ZVL6 1849 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 S100A9P06702 114 aaKnown RBP18.02■□□□□ 0.47
TRIM58-201ENST00000366481 VSIG10L2P0DP72 767 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 MAKP20794 623 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 P2RX1P51575 399 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 ODF4Q2M2E3 257 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 MCATQ8IVS2 390 aaKnown RBP18.02■□□□□ 0.47
TRIM58-201ENST00000366481 MUC20Q8N307 709 aaPredicted RBP18.02■□□□□ 0.47
TRIM58-201ENST00000366481 THAP6Q8TBB0 222 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 RELTQ969Z4 430 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 MRPS2Q9Y399 296 aaKnown RBP18.02■□□□□ 0.47
TRIM58-201ENST00000366481 ARID1AO14497 2285 aa18.02■□□□□ 0.47
TRIM58-201ENST00000366481 CBR1P16152 277 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 HSD17B2P37059 387 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 UBXN2BQ14CS0 331 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 PABPC1L2AQ5JQF8 200 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 ZCCHC12Q6PEW1 402 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 VN1R4Q7Z5H5 301 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 OR4K13Q8NH42 304 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 PATE1Q8WXA2 126 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF681Q96N22 645 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 FKRPQ9H9S5 495 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 ADAM29Q9UKF5 820 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 P2RX6O15547 441 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 PRKNO60260 465 aaPredicted RBP18.01■□□□□ 0.47
TRIM58-201ENST00000366481 RCBTB2O95199 551 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 LAMP2P13473 410 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 GTF2F2P13984 249 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 NT5EP21589 574 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 KCNJ3P48549 501 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 SIRPAP78324 504 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 ZIC1Q15915 447 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 DMKNQ6E0U4 476 aaPredicted RBP18.01■□□□□ 0.47
TRIM58-201ENST00000366481 MRM1Q6IN84 353 aaKnown RBP18.01■□□□□ 0.47
TRIM58-201ENST00000366481 BEST3Q8N1M1 668 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 TEX101Q9BY14 249 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 FN3KQ9H479 309 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 TCF7L1Q9HCS4 588 aa18.01■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF443Q9Y2A4 671 aaPredicted RBP18.01■□□□□ 0.47
TRIM58-201ENST00000366481 A0A1B0GVT2 93 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 OR14I1A6ND48 311 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 OR5K4A6NMS3 321 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ACOT7O00154 380 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 OR2A4O95047 310 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 NDUFB6O95139 128 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 PBX2P40425 430 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 BLOC1S1P78537 153 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 MAT1AQ00266 395 aaKnown RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 C12orf45Q8N5I9 185 aaPredicted RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 OR52E2Q8NGJ4 325 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 DVL3Q92997 716 aaPredicted RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 OR2A7Q96R45 310 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF559Q9BR84 538 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 CRB3Q9BUF7 120 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 HDAC8Q9BY41 377 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ACTRT3Q9BYD9 372 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 TMPRSS13Q9BYE2 586 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 NDRG3Q9UGV2 375 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ARHGEF17Q96PE2 2063 aaPredicted RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 OR2W5A6NFC9 320 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 CAPZA2P47755 286 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 TFF2Q03403 129 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 SERTAD2Q14140 314 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 GXYLT1Q4G148 440 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM240Q5SV17 173 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 SEZ6L2Q6UXD5 910 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 SDR9C7Q8NEX9 313 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 OR2L8Q8NGY9 312 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 SLC25A28Q96A46 364 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ZNF75AQ96N20 296 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ESRP2Q9H6T0 727 aaKnown RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 COMMD9Q9P000 198 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 CFAP54Q96N23 3096 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 TRAV1-2A0A0B4J238 106 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 IFITM5A6NNB3 132 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 HMSDA8MTL9 139 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 SNRPGP15A8MWD9 76 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ABCD4O14678 606 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 F12P00748 615 aaPredicted RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 HNRNPA1P09651 372 aaKnown RBP eCLIP18■□□□□ 0.47
TRIM58-201ENST00000366481 NNATQ16517 81 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ARHGDIGQ99819 225 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 ADGRL4Q9HBW9 690 aa18■□□□□ 0.47
TRIM58-201ENST00000366481 EXOSC3Q9NQT5 275 aaKnown RBP18■□□□□ 0.47
TRIM58-201ENST00000366481 SNAPC5O75971 98 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 ITPKBP27987 946 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 HTR2AP28223 471 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 IGFALSP35858 605 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 FXYD6P3P58550 94 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 MLC1Q15049 377 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM35AQ53FP2 167 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 FAM209BQ5JX69 171 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 MFSD12Q6NUT3 480 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 ENPP7Q6UWV6 458 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 ZAR1Q86SH2 424 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 TMPRSS12Q86WS5 348 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 TMEM239Q8WW34 195 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 PELI1Q96FA3 418 aa17.99■□□□□ 0.47
TRIM58-201ENST00000366481 SEC22AQ96IW7 307 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms