RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 VSTM5A8MXK1 200 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 RPL36A-HNRNPH2H7BZ11 118 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ANKRD28O15084 1053 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 SCAMP2O15127 329 aaKnown RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 RAD51CO43502 376 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF432O94892 652 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 TACR3P29371 465 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ARR3P36575 388 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 CRYBB2P43320 205 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 PRKAA2P54646 552 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ERVS71-1P61550 626 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 PIGFQ07326 219 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF154Q13106 437 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR7A5Q15622 319 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 TAF9Q16594 264 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 IMPG1Q17R60 797 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 RFTN2Q52LD8 501 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ARMCX4Q5H9R4 360 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 VAX1Q5SQQ9 334 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 USP51Q70EK9 711 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 EIF3MQ7L2H7 374 aaKnown RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ABHD12BQ7Z5M8 362 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 PAQR4Q8N4S7 273 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 NOA1Q8NC60 698 aaKnown RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 PSMA8Q8TAA3 256 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 L3HYPDHQ96EM0 354 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF317Q96PQ6 595 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 NAA11Q9BSU3 229 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 GATA5Q9BWX5 397 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF350Q9GZX5 532 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 TUBB1Q9H4B7 451 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF385DQ9H6B1 395 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 BEX1Q9HBH7 125 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 MID1IP1Q9NPA3 183 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 TNFRSF19Q9NS68 423 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 SEC14L4Q9UDX3 406 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 DUSP13Q9UII6 198 aa7.17□□□□□ -1.26
HMGB1P39-201ENST00000366304 DYNC2H1Q8NCM8 4307 aaKnown RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLPSL1A2RUU4 121 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 C17orf100A8MU93 164 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 H0YL77 283 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 TIMM23O14925 209 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF208O43345 1280 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 C6orf47O95873 294 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 NGFP01138 241 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 NEFHP12036 1026 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF12P17014 697 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 MAKP20794 623 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 PAX7P23759 505 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 PRPH2P23942 346 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 RAD52P43351 418 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ATP4BP51164 291 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 BNIP2Q12982 314 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CALCOCO2Q13137 446 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 FAM189A2Q15884 450 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CEACAM16Q2WEN9 425 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLEC6AQ6EIG7 209 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 TYW3Q6IPR3 259 aaKnown RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CCBE1Q6UXH8 406 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF584Q8IVC4 421 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 GLB1L3Q8NCI6 653 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 FGFBP3Q8TAT2 258 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CCT7Q99832 543 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 LINC00470Q9BZP3 86 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 CHIAQ9BZP6 476 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ACSS3Q9H6R3 686 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 MARCH7Q9H992 704 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 NPHS2Q9NP85 383 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 HINT3Q9NQE9 182 aaKnown RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 SLC6A13Q9NSD5 602 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 ADPRHL2Q9NX46 363 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 UBAP1Q9NZ09 502 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 TAAR3PQ9P1P4 343 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 GIMAP2Q9UG22 337 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 PCDHGB4Q9UN71 923 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 FAF1Q9UNN5 650 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 INSIG2Q9Y5U4 225 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 AUP1Q9Y679 476 aa7.16□□□□□ -1.26
HMGB1P39-201ENST00000366304 PPIAL4EA0A075B759 164 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PPIAL4CA0A0B4J2A2 164 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 A0A1W2PPW3 197 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PPIAL4DF5H284 164 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 CCDC188H7C350 402 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 NDUFA7O95182 113 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PLATP00750 562 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PATE4P0C8F1 98 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PPIAL4FP0DN26 164 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 TCP1P17987 556 aaKnown RBP7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 CD80P33681 288 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 CAPZA2P47755 286 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 POLR2HP52434 150 aaKnown RBP7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 AQP5P55064 265 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 SH3BGRP55822 239 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLDN17P56750 224 aa7.15□□□□□ -1.26
HMGB1P39-201ENST00000366304 PROK1P58294 105 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms