RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 SMIM10Q96HG1 83 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 SEC22AQ96IW7 307 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 DNAJC1Q96KC8 554 aaKnown RBP0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 C12orf66Q96MD2 445 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 TM2D3Q9BRN9 247 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 LINC00597Q9H2U6 94 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 DHX33Q9H6R0 707 aaKnown RBP0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 WDR76Q9H967 626 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 IL26Q9NPH9 171 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 SIGLEC8Q9NYZ4 499 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 TBK1Q9UHD2 729 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 TENM3Q9P273 2699 aa0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 FLG2Q5D862 2391 aaPredicted RBP0.41□□□□□ -2.34
RNU4-90P-201ENST00000362773 COL22A1Q8NFW1 1626 aaPredicted RBP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 XKRYO14609 159 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 XPO1O14980 1071 aaKnown RBP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 RS1O15537 224 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 C1GALT1C1LP0DN25 315 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 FOLR1P15328 257 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 PRRX1P54821 245 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 RPS11P62280 158 aaKnown RBP eCLIP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ERCC8Q13216 396 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ZNF235Q14590 738 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 HES5Q5TA89 166 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 OR6B2Q6IFH4 312 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 HSDL2Q6YN16 418 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ZNF546Q86UE3 836 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 OR2L13Q8N349 312 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 NKAIN3Q8N8D7 197 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 OR56B1Q8NGI3 324 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 GIPC3Q8TF64 312 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 C17orf50Q8WW18 174 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 HTR3CQ8WXA8 447 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 FGF14Q92915 247 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 AKR1E2Q96JD6 320 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 MRPL45Q9BRJ2 306 aaKnown RBP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 SHANK2-AS3Q9BTD1 123 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ACTR6Q9GZN1 396 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ATG10Q9H0Y0 220 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 RANBP3Q9H6Z4 567 aaPredicted RBP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 ECT2Q9H8V3 914 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 YAE1D1Q9NRH1 226 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 KLHL28Q9NXS3 571 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 AIPL1Q9NZN9 384 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 SIGLEC7Q9Y286 467 aa0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 STRAPQ9Y3F4 350 aaKnown RBP0.4□□□□□ -2.35
RNU4-90P-201ENST00000362773 RPGRIP1LQ68CZ1 1315 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 THADAQ6YHU6 1953 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 CFAP73A6NFT4 308 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ARHGAP42A6NI28 874 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 LOC110117498-PIK3R3F6TDL0 507 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 DDX39AO00148 427 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 HIP1O00291 1037 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 MRPS12O15235 138 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 SOCS1O15524 211 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 UGT1A9O60656 530 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 TBX19O60806 448 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 RHOBTB1O94844 696 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 OR56A5P0C7T3 313 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 RRASP10301 218 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 COX5AP20674 150 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 MUTP22033 750 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 AHCYP23526 432 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 NAMPTP43490 491 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 GDI2P50395 445 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ARF5P84085 180 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 RPA4Q13156 261 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 MICBQ29980 383 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ZBED5Q49AG3 693 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 FAM133BQ5BKY9 247 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 FAM78AQ5JUQ0 283 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 SAMD4BQ5PRF9 694 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 AFTPHQ6ULP2 937 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 H2AFVQ71UI9 128 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ZADH2Q8N4Q0 377 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 FAM71CQ8NEG0 241 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 VN1R2Q8NFZ6 395 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 OR4D9Q8NGE8 314 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 FCGR1BQ92637 280 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 TSSK3Q96PN8 268 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ZNF382Q96SR6 550 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 DHX35Q9H5Z1 703 aaKnown RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 ROPN1Q9HAT0 212 aaPredicted RBP0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 UGT1A7Q9HAW7 530 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 UGT1A10Q9HAW8 530 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 UGT1A8Q9HAW9 530 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 MID1IP1Q9NPA3 183 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 SPATA7Q9P0W8 599 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 SEC14L3Q9UDX4 400 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 B9D1Q9UPM9 204 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 NUDCQ9Y266 331 aa0.39□□□□□ -2.35
RNU4-90P-201ENST00000362773 SF3B1O75533 1304 aaKnown RBP eCLIP0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 ADAMTS13Q76LX8 1427 aa0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 AHDC1Q5TGY3 1603 aaPredicted RBP0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 TICRRQ7Z2Z1 1910 aa0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 CARMIL1Q5VZK9 1371 aa0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 CEMIPQ8WUJ3 1361 aa0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 IGHV3-74A0A0B4J1X5 117 aa0.38□□□□□ -2.35
RNU4-90P-201ENST00000362773 FAM230AA0A1W2PPH8 454 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms