RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 LRRC46Q96FV0 321 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 CENPNQ96H22 339 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 FAM46AQ96IP4 442 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 OSBPL10Q9BXB5 764 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 FOXD3Q9UJU5 478 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 PROCRQ9UNN8 238 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 NOSIPQ9Y314 301 aaKnown RBP12.29□□□□□ -0.44
NSMCE1-201ENST00000361439 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 BLOC1S5-TXNDC5H3BN57 136 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 CDC42EP2O14613 210 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 RNF13O43567 381 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 PTP4A3O75365 173 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 MRPL33O75394 65 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 ADAP00813 363 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 CBLP22681 906 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 AHCYP23526 432 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 OR3A2P47893 321 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 GSSP48637 474 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 C1DQ13901 141 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 FBXL19-AS1Q494R0 122 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 SHQ1Q6PI26 577 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 NCCRP1Q6ZVX7 275 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 HIPK1Q86Z02 1210 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 EPHX4Q8IUS5 362 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 ZIC4Q8N9L1 334 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 OR5K1Q8NHB7 308 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 GIPC3Q8TF64 312 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 PYDC1Q8WXC3 89 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 STMN2Q93045 179 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 ADAD1Q96M93 576 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 NTN4Q9HB63 628 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 VNN3Q9NY84 501 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 SEC14L4Q9UDX3 406 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 SIGLEC7Q9Y286 467 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 KLF2Q9Y5W3 355 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 U3KQV3 271 aa12.28□□□□□ -0.44
NSMCE1-201ENST00000361439 KIAA1549Q9HCM3 1950 aa12.27□□□□□ -0.44
NSMCE1-201ENST00000361439 A0A1W2PRG6 482 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 UNC119BA6NIH7 251 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 A8MXE2 369 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 H3BNX3 289 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ENTPD5O75356 428 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 HPRP00739 348 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ANXA8P13928 327 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 PEX19P40855 299 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 GPR4P46093 362 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ASCL1P50553 236 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 RPL18Q07020 188 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 FHL1Q13642 323 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ALG10Q5BKT4 473 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 VWA1Q6PCB0 445 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 BEND4Q6ZU67 534 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 BTLAQ7Z6A9 289 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ZDHHC13Q8IUH4 622 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 OR10G2Q8NGC3 310 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 APH1AQ96BI3 265 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 LRR1Q96L50 414 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 S100A14Q9HCY8 104 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 INIPQ9NRY2 104 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 ELOVL5Q9NYP7 299 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 CLEC4AQ9UMR7 237 aa12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-201ENST00000361439 TRAF3IP2O43734 574 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF432O94892 652 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 NDUFB2O95178 105 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 GASTP01350 101 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 IGHMP01871 453 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 AQP2P41181 271 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 SIRPAP78324 504 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 IL1RL1Q01638 556 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 SMARCD3Q6STE5 483 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 TFAP2EQ6VUC0 442 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 Q6ZT83 130 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 AAED1Q7RTV5 226 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 NUFIP2Q7Z417 695 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 LIX1LQ8IVB5 337 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF100Q8IYN0 542 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 CLDN22Q8N7P3 220 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 POMGNT2Q8NAT1 580 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
NSMCE1-201ENST00000361439 OR51A7Q8NH64 312 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms