RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OR2L13Q8N349 312 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CHST14Q8NCH0 376 aa9□□□□□ -0.97
CUX1-203ENST00000360264 C1GALT1Q9NS00 363 aa9□□□□□ -0.97
CUX1-203ENST00000360264 GABRQQ9UN88 632 aa9□□□□□ -0.97
CUX1-203ENST00000360264 DRD5P21918 477 aa9□□□□□ -0.97
CUX1-203ENST00000360264 C18orf21Q32NC0 220 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 LIPIQ6XZB0 460 aa9□□□□□ -0.97
CUX1-203ENST00000360264 LINC00597Q9H2U6 94 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SPACA1Q9HBV2 294 aa9□□□□□ -0.97
CUX1-203ENST00000360264 MARCH4Q9P2E8 410 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 PTPN13Q12923 2485 aa9□□□□□ -0.97
CUX1-203ENST00000360264 XKRY2A2RUG3 117 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ZNF732B4DXR9 585 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CNIH1O95406 144 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PAX6P26367 422 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SEC61A1P61619 476 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 DEFB133Q30KQ1 61 aa9□□□□□ -0.97
CUX1-203ENST00000360264 HSD11B1LQ7Z5J1 315 aa9□□□□□ -0.97
CUX1-203ENST00000360264 FCRL1Q96LA6 429 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ABHD6Q9BV23 337 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TPSD1Q9BZJ3 242 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TM7SF3Q9NS93 570 aa9□□□□□ -0.97
CUX1-203ENST00000360264 NECAP2Q9NVZ3 263 aa9□□□□□ -0.97
CUX1-203ENST00000360264 KDM4EB2RXH2 506 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 RNLSQ5VYX0 342 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TFAP2EQ6VUC0 442 aa9□□□□□ -0.97
CUX1-203ENST00000360264 VN1R2Q8NFZ6 395 aa9□□□□□ -0.97
CUX1-203ENST00000360264 KIRREL1Q96J84 757 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SLC25A18Q9H1K4 315 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ARPC1BO15143 372 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 PLXNB1O43157 2135 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TUSC2O75896 110 aa9□□□□□ -0.97
CUX1-203ENST00000360264 HLA-DMAP28067 261 aa9□□□□□ -0.97
CUX1-203ENST00000360264 UBE2KP61086 200 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 PLPP5Q8NEB5 264 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SLC22A11Q9NSA0 550 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PISDQ9UG56 409 aa9□□□□□ -0.97
CUX1-203ENST00000360264 EBF1Q9UH73 591 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ADAM10O14672 748 aa9□□□□□ -0.97
CUX1-203ENST00000360264 GABRA5P31644 462 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CLLU1OSQ5K130 101 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PIP5KL1Q5T9C9 394 aa9□□□□□ -0.97
CUX1-203ENST00000360264 KDF1Q8NAX2 398 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 OR9Q2Q8NGE9 314 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PHF3Q92576 2039 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 TRAV36DV7A0A075B6V5 113 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ZCWPW2A0A1B0GU75 182 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 PRDX1Q06830 199 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 FAM217AQ8IXS0 508 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 BORCS6Q96GS4 357 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 INTS6Q9UL03 887 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 MT-ND4P03905 459 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 PSMB3P49720 205 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 HBMQ6B0K9 141 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 EID2Q8N6I1 236 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 PHYHIPQ92561 330 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 TFAP2CQ92754 450 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 APH1AQ96BI3 265 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SOX7Q9BT81 388 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 GNB4Q9HAV0 340 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 E9PI62 339 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 CLEC3BP05452 202 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 POU3F3P20264 500 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 HTR5AP47898 357 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 EXOSC7Q15024 291 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 DTWD1Q8N5C7 304 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ZNF865P0CJ78 1059 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.99□□□□□ -0.974e-6■■□□□ 11.4
CUX1-203ENST00000360264 MEPCEQ7L2J0 689 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 STT3BQ8TCJ2 826 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 NDRG4Q9ULP0 352 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 GABRPO00591 440 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 GPR171O14626 319 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 PRRG2O14669 202 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 F7P08709 466 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 HNRNPFP52597 415 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 LPAL2Q16609 132 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 MFSD6LQ8IWD5 586 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 OR2A12Q8NGT7 310 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 LYRM4Q9HD34 91 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 FAM171A2A8MVW0 826 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 HCRTR1O43613 425 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SQSTM1Q13501 440 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 NCCRP1Q6ZVX7 275 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 ADGRG5Q8IZF4 528 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SLC35G3Q8N808 338 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 DCLRE1CQ96SD1 692 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 TMEM43Q9BTV4 400 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 USF3Q68DE3 2245 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 CRYM-AS1A6NIL9 109 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 TACR1P25103 407 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 DCTP40126 519 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 RACK1P63244 317 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 FRMPD2BQ6IN97 320 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 DTX3Q8N9I9 347 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 LMO3Q8TAP4 145 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SLC25A43Q8WUT9 341 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms