RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HPGDP15428 266 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 MYL12AP19105 171 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 EVI2BP34910 448 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 EMP2P54851 167 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 TMEM65Q6PI78 240 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 HSDL2Q6YN16 418 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 LINC00518Q8N0U6 118 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC25A46Q96AG3 418 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 ISYNA1Q9NPH2 558 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 COMMD3Q9UBI1 195 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 EIF3KQ9UBQ5 218 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 COPS7AQ9UBW8 275 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 TMEM129A0AVI4 362 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 SCDO00767 359 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 NCR1O76036 304 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 APEX1P27695 318 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 HTR1FP30939 366 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 HLA-DQA1Q5Y7H0 255 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 KIRREL2Q6UWL6 708 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 GDPGP1Q6ZNW5 385 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 GID4Q8IVV7 300 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 ATP6V1C2Q8NEY4 427 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 NLGN4YQ8NFZ3 816 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 OR1N1Q8NGS0 311 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.396e-7■■■■■ 27.1
CSNK1E-201ENST00000359867 EXOGQ9Y2C4 368 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 ZFHX4Q86UP3 3567 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 FRYQ5TBA9 3013 aa12.62□□□□□ -0.39
CSNK1E-201ENST00000359867 A0A087WUJ7 227 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 OR6C70A6NIJ9 312 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 STMND1H3BQB6 276 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 PLA2G10O15496 165 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 ALOX12BO75342 701 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 UTS2O95399 124 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 UMODP07911 640 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 PTNP21246 168 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 F8A1P23610 371 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 EBPQ15125 230 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 TGIF1Q15583 401 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 CRTC2Q53ET0 693 aaPredicted RBP12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 WDFY2Q96P53 400 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 WDR54Q9H977 334 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 IQCMA0A1B0GVH7 501 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 SMLR1H3BR10 107 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 RAD1O60671 282 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 PPM1BO75688 479 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 IGF2P01344 180 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 ASAH1Q13510 395 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 CXXC5Q7LFL8 322 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 C17orf47Q8NEP4 570 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 OR13C2Q8NGS9 318 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 ENKURQ8TC29 256 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 LMF1Q96S06 567 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 JAM3Q9BX67 310 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 RNF121Q9H920 327 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
CSNK1E-201ENST00000359867 CIB4A0PJX0 185 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 TOR1AO14656 332 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 EFR3AQ14156 821 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 INSL4Q14641 139 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 WBP2NLQ6ICG8 309 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 ANKRD37Q7Z713 158 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 OAFQ86UD1 273 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 C9orf40Q8IXQ3 194 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 METTL21AQ8WXB1 218 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 DEDD2Q8WXF8 326 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 FBXW5Q969U6 566 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 FRMD6Q96NE9 622 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 DCLRE1CQ96SD1 692 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 HINT3Q9NQE9 182 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 CMC2Q9NRP2 79 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 IL20RAQ9UHF4 553 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 MRPS18BQ9Y676 258 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 PRKNO60260 465 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 NGFRP08138 427 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 PNMTP11086 282 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 FUT1P19526 365 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 SDHBP21912 280 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 SLC6A6P31641 620 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 DLSTP36957 453 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 WNT4P56705 351 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 FOXK2Q01167 660 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 P2RY14Q15391 338 aa12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.6□□□□□ -0.39
CSNK1E-201ENST00000359867 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms