RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HCRTR1O43613 425 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 FADS1O60427 444 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 PDGFAP04085 211 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 PRKACAP17612 351 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 HTR3AP46098 478 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SEC61A1P61619 476 aaKnown RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 DCAF7P61962 342 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 B4GALNT1Q00973 533 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 STEAP1BQ6NZ63 245 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 TRAPPC6BQ86SZ2 158 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ZNF695Q8IW36 515 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 TCTN2Q96GX1 697 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 EHFQ9NZC4 300 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 TBC1D29Q9UFV1 150 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SLC23A2Q9UGH3 650 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SUSD5O60279 629 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SIX6O95475 246 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 IGHG1P01857 330 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 DBHP09172 617 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 LIM2P55344 173 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 TEKQ02763 1124 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SLC16A9Q7RTY1 509 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 MSRB3Q8IXL7 192 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 VN1R2Q8NFZ6 395 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
VCP-201ENST00000358901 SPIN2AQ99865 258 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 SPIN2BQ9BPZ2 258 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 KIR3DX1Q9H7L2 352 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 GLTPQ9NZD2 209 aa12.67□□□□□ -0.38
VCP-201ENST00000358901 EFCAB7A8K855 629 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 HBQ1P09105 142 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 S100PP25815 95 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 LBX1P52954 281 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 KIAA1024LP59773 190 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 ESCO2Q56NI9 601 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 LIPNQ5VXI9 398 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 ESX1Q8N693 406 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 OR5T1Q8NG75 326 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 OR5D18Q8NGL1 313 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 DDOQ99489 341 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 NRSN2Q9GZP1 204 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
VCP-201ENST00000358901 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 SERPINE2P07093 398 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 SELENOVP59797 346 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 FABP5Q01469 135 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 ZNF77Q15935 545 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PRSS36Q5K4E3 855 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 DNAAF1Q8NEP3 725 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PKMYT1Q99640 499 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 IL21Q9HBE4 155 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 SIRT5Q9NXA8 310 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 B4DXG7 233 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PPM1DO15297 605 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 MAGEB4O15481 346 aaPredicted RBP12.66□□□□□ -0.38
VCP-201ENST00000358901 CTNSO60931 367 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PAPLNO95428 1278 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 IFNGR1P15260 489 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PPP3CBP16298 524 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 CPEP16870 476 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 RAB6AP20340 208 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 HCCSP53701 268 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 EEF1A1P68104 462 aaKnown RBP12.66□□□□□ -0.38
VCP-201ENST00000358901 GLYATL3Q5SZD4 288 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 CALHM3Q86XJ0 350 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PRR18Q8N4B5 295 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PLPP7Q8NBV4 271 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PHYHIPQ92561 330 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 PFDN5Q99471 154 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 DOCK2Q92608 1830 aa12.66□□□□□ -0.38
VCP-201ENST00000358901 TRBV11-1A0A0K0K1C0 115 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 POM121BA6NF01 834 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 EPHA1P21709 976 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 MELKQ14680 651 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CDKN3Q16667 212 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CLVS2Q5SYC1 327 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 TECPR1Q7Z6L1 1165 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 ADGRF3Q8IZF5 1079 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CTRCQ99895 268 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 C1orf198Q9H425 327 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms