RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GPR148Q8TDV2 347 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TRMT61AQ96FX7 289 aaKnown RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 PFDN5Q99471 154 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ARHGDIGQ99819 225 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 C12orf10Q9HB07 376 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 KRBOX1C9JBD0 128 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 DOK2O60496 412 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 EML2O95834 649 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ARRB1P49407 418 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 COL28A1Q2UY09 1125 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 FAM76BQ5HYJ3 339 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TMEM201Q5SNT2 666 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 PHF19Q5T6S3 580 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TSEN54Q7Z6J9 526 aaKnown RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 CCDC107Q8WV48 283 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 INTS14Q96SY0 518 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 FBXL4Q9UKA2 621 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 OR5K3A6NET4 321 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 CYB5AP00167 134 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 RLN2P04090 185 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 HEXBP07686 556 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 H2BFMP0C1H6 154 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TACR3P29371 465 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 CARD17Q5XLA6 110 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 BAHD1Q8TBE0 780 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GIMAP1Q8WWP7 306 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TMEM41AQ96HV5 264 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 STACQ99469 402 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GSX2Q9BZM3 304 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SERINC1Q9NRX5 453 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 F8W036 122 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF264O43296 627 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.6
COL20A1-201ENST00000358894 TCRBP04435 133 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 CFIP05156 583 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 BLOC1S1P78537 153 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 IRF3Q14653 427 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 BEX5Q5H9J7 111 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF595Q8IYB9 648 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 NAXEQ8NCW5 288 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 MORN4Q8NDC4 146 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ADAMTS18Q8TE60 1221 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ADAMTS14Q8WXS8 1223 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 TMEM234Q8WY98 164 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 SENP5Q96HI0 755 aaPredicted RBP11.27□□□□□ -0.6
COL20A1-201ENST00000358894 SLC6A18Q96N87 628 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.6
COL20A1-201ENST00000358894 CEP350Q5VT06 3117 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 DUX1O43812 170 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 SLC43A1O75387 559 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 GABRB1P18505 474 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 PRKXP51817 358 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 APOOLQ6UXV4 268 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 OR4K17Q8NGC6 315 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF350Q9GZX5 532 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 KDM4EB2RXH2 506 aaPredicted RBP11.27□□□□□ -0.61
COL20A1-201ENST00000358894 AGPAT2O15120 278 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 EMDP50402 254 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 NKAIN2Q5VXU1 208 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 TMEM225Q6GV28 225 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 SLC18B1Q6NT16 456 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 TMEM106AQ96A25 262 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.61
COL20A1-201ENST00000358894 SEMA6CQ9H3T2 930 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.61
COL20A1-201ENST00000358894 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 TNFRSF10CO14798 259 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 SPINT1O43278 529 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 TLX3O43711 291 aaPredicted RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 CTNSO60931 367 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 UBL3O95164 117 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 DGCR2P98153 550 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 MC2RQ01718 297 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 FGL1Q08830 312 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms