RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR2AK2Q8NG84 335 aa5.65□□□□□ -1.5
VPS13B-203ENST00000358544 FAM74A7A6NL05 159 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 SYT7O43581 403 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 NME2P1O60361 137 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 LILRB5O75023 590 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 POP7O75817 140 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 HMGCLP35914 325 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 SELENOPP49908 381 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 MAP2K5Q13163 448 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 FAM74A3Q4VXF1 159 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 C2orf15Q8WU43 125 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 CCDC74BQ96LY2 380 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 SRA1Q9HD15 236 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 DKKL1Q9UK85 242 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 USP3Q9Y6I4 520 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 A0A087X0M5 115 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 A0A1B0GX30 115 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 SPP1P10451 314 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 NKG7Q16617 165 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 COX15Q7KZN9 410 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 MAMDC2Q7Z304 686 aaPredicted RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 NAXDQ8IW45 347 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 OR4C5Q8NGB2 326 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZFPM2Q8WW38 1151 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 KHSRPQ92945 711 aaKnown RBP eCLIP5.65□□□□□ -1.518e-10■■■□□ 19
VPS13B-203ENST00000358544 TNFRSF12AQ9NP84 129 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 KIDINS220Q9ULH0 1771 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 OR9K2Q8NGE7 335 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 IER2Q9BTL4 223 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 COPS7AQ9UBW8 275 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 GOLT1BQ9Y3E0 138 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 M0R082 166 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 AP4M1O00189 453 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 RTCAO00442 366 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 MSTNO14793 375 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF8P17098 575 aaPredicted RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF273Q14593 569 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 STEAP1BQ6NZ63 245 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 MCEMP1Q8IX19 187 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF440Q8IYI8 595 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 NINJ1Q92982 152 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 A4GALTQ9NPC4 353 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 KLHL13Q9P2N7 655 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 SOWAHBA6NEL2 793 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 MC3RP41968 323 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 CD81P60033 236 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF600Q6ZNG1 722 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 PHYHIPQ92561 330 aa5.65□□□□□ -1.51
VPS13B-203ENST00000358544 PATZ1Q9HBE1 687 aaKnown RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ATXN7L1Q9ULK2 861 aaPredicted RBP5.65□□□□□ -1.51
VPS13B-203ENST00000358544 ANKRD11Q6UB99 2663 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 COL5A2P05997 1499 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 C11orf98E9PRG8 122 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 BRINP1O60477 761 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PLGP00747 810 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 AKR1A1P14550 325 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PCP4P48539 62 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HBA1P69905 142 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SSBP1Q04837 148 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF266Q14584 549 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 IQCJQ1A5X6 159 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF852Q6ZMS4 543 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMPRSS7Q7RTY8 843 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF695Q8IW36 515 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 LRRC25Q8N386 305 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SIGLECL1Q8N7X8 197 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR4K15Q8NH41 348 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CRYGNQ8WXF5 182 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 KLRG1Q96E93 195 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 G6PC3Q9BUM1 346 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TESQ9UGI8 421 aaKnown RBP5.64□□□□□ -1.51
VPS13B-203ENST00000358544 FZD1Q9UP38 647 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR1D2P34982 312 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CCL23P55773 120 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 VGLL4Q14135 290 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 MPPED2Q15777 294 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 HAGHQ16775 308 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SHEQ5VZ18 495 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PIANPQ8IYJ0 282 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR1J2Q8NGS2 313 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NUDCD2Q8WVJ2 157 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CDS1Q92903 461 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SLC35A3Q9Y2D2 325 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 OR5H14A6NHG9 310 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 FAM171A2A8MVW0 826 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SOCS7O14512 581 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SOD1P00441 154 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 WNT1P04628 370 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 NAGAP17050 411 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 SLC14A2Q15849 920 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 PHYHD1Q5SRE7 291 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TRAM1L1Q8N609 369 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM174Q8WUU8 243 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 C3P01024 1663 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM150CB9EJG8 249 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 RNASEK-C17orf49H0YIS7 233 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 CCSO14618 274 aa5.64□□□□□ -1.51
VPS13B-203ENST00000358544 TNFSF12O43508 249 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms