RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OR9K2Q8NGE7 335 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 OXGR1Q96P68 337 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 SF3B5Q9BWJ5 86 aaKnown RBP13.23□□□□□ -0.29
CCNE1-202ENST00000357943 GABARAPL1Q9H0R8 117 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 BCO1Q9HAY6 547 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 KIF17Q9P2E2 1029 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 IGKV3D-15A0A087WSY6 115 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 SOX14O95416 240 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 TP53P04637 393 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-202ENST00000357943 IGFBP1P08833 259 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF43P17038 809 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 NTF4P34130 210 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 PPP2R2BQ00005 443 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 POU3F1Q03052 451 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-202ENST00000357943 PDK3Q15120 406 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 GUSBP1Q15486 140 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 OR2A2Q6IF42 318 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF620Q6ZNG0 422 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 CREB3L2Q70SY1 520 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 FANK1Q8TC84 345 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 GMPPAQ96IJ6 420 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF385AQ96PM9 386 aaKnown RBP13.22□□□□□ -0.29
CCNE1-202ENST00000357943 UCK2Q9BZX2 261 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 OR52D1Q9H346 318 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 EGLN3Q9H6Z9 239 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF556Q9HAH1 456 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 Q9UFV3 132 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 FLVCR1Q9Y5Y0 555 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 COL12A1Q99715 3063 aa13.22□□□□□ -0.29
CCNE1-202ENST00000357943 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 LOC102725191A0A1B0GVB3 256 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 MCIDASD6RGH6 385 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 SOCS2O14508 198 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 EI24O14681 340 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TRAF3IP2O43734 574 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TNFSF13O75888 250 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 YES1P07947 543 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TMIGD3P0DMS9 266 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 GSTM3P21266 225 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 AGTR1P30556 359 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 VHLP40337 213 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 KIR2DL2P43627 348 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 PRPS1P60891 318 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 COX10Q12887 443 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TRIP10Q15642 601 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 ANKDD1AQ495B1 522 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 C4orf17Q53FE4 359 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 RIPPLY2Q5TAB7 128 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 EEF1A1P5Q5VTE0 462 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 KDM4DQ6B0I6 523 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TMEM211Q6ICI0 200 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 SMARCD3Q6STE5 483 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 CD300LDQ6UXZ3 194 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 RASSF6Q6ZTQ3 369 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 FAM214BQ7L5A3 538 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 UEVLDQ8IX04 471 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 CBR4Q8N4T8 237 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 ZIC4Q8N9L1 334 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 LRRC75AQ8NAA5 344 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 RND1Q92730 232 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 EME1Q96AY2 570 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 CCDC120Q96HB5 630 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 SLC29A1Q99808 456 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 MED29Q9NX70 200 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 REV1Q9UBZ9 1251 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-202ENST00000357943 ADGRG4Q8IZF6 3080 aa13.21□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF724A8MTY0 619 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 NDUFB2O95178 105 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 PEX2P28328 305 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 SIRPAP78324 504 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 C1DQ13901 141 aaKnown RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 RFX4Q33E94 735 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 VWA1Q6PCB0 445 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 GALNT5Q7Z7M9 940 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 MED12LQ86YW9 2145 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 WDFY1Q8IWB7 410 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 CNEP1R1Q8N9A8 125 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 ANKK1Q8NFD2 765 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 MAGEE2Q8TD90 523 aaPredicted RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 TXNDC15Q96J42 360 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 SAMD8Q96LT4 415 aa13.21□□□□□ -0.3
CCNE1-202ENST00000357943 RBM4BQ9BQ04 359 aaKnown RBP13.21□□□□□ -0.3
CCNE1-202ENST00000357943 RBM4Q9BWF3 364 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms