RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SLC9B1P1A6NJY1 282 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 CD53P19397 219 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 GDF1P27539 372 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 HLA-FP30511 346 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 PDE7AQ13946 482 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 ZNF620Q6ZNG0 422 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MOB3CQ70IA8 216 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SYT13Q7L8C5 426 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 OR11L1Q8NGX0 322 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MOCOSQ96EN8 888 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 SLC41A2Q96JW4 573 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 OLAHQ9NV23 265 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
SMC4-202ENST00000357388 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 TMEM72A0PK05 275 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 A6NL46 340 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 C17orf105B2RV13 164 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 RAD1O60671 282 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 DDAH2O95865 285 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 FABP1P07148 127 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 H2AFB1P0C5Y9 115 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 HOXC13P31276 330 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 SFTPDP35247 375 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 SLC17A1Q14916 467 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 LPAL2Q16609 132 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 ADGRE4PQ86SQ3 457 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CDH26Q8IXH8 852 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 DMBX1Q8NFW5 382 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 RPL3LQ92901 407 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 INTS12Q96CB8 462 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 TMEM235A6NFC5 223 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 A6NIN4 97 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 SIX6O95475 246 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 NSA2O95478 260 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 CLDN1O95832 211 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 APEX1P27695 318 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 HTR1FP30939 366 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 OR1Q1Q15612 314 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 PBX4Q9BYU1 374 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 NECAP2Q9NVZ3 263 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 ADAM29Q9UKF5 820 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 SLC16A7O60669 478 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 GCAP28676 217 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CADM3Q8N126 398 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 FGGYQ96C11 551 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CPPED1Q9BRF8 314 aaPredicted RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 RRP8O43159 456 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 PDGFBP01127 241 aaPredicted RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 DCAF7P61962 342 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CTSL3PQ5NE16 218 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 ACOT7LQ6ZUV0 252 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 LSMEM2Q8N112 164 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 BPIFCQ8NFQ6 507 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CMTM2Q8TAZ6 248 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 CHRDL1Q9BU40 450 aa11.94□□□□□ -0.5
SMC4-202ENST00000357388 USP36Q9P275 1121 aaKnown RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 MN1Q10571 1320 aaPredicted RBP11.94□□□□□ -0.5
SMC4-202ENST00000357388 NPIPA5A0A0B4J1W7 369 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR2A25A4D2G3 310 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CSO75390 466 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 ZIC2O95409 532 aaPredicted RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 POU3F3P20264 500 aaPredicted RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 OMGP23515 440 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 DAPP51397 102 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 ZNF684Q5T5D7 378 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 Q6ZSR6 202 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OVCH1Q7RTY7 1134 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CATSPERDQ86XM0 798 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 PRSS35Q8N3Z0 413 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 MRPS28Q9Y2Q9 187 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 GABRR3A8MPY1 467 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 HMGN2P05204 90 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 CA3P07451 260 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CALCBP10092 127 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 PIPP12273 146 aaPredicted RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 NLRC3Q7RTR2 1065 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 DNAJA3Q96EY1 480 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 ACPTQ9BZG2 426 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 NXF5Q9H1B4 397 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 ZMAT5Q9UDW3 170 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms