RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 M0R3H8 397 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MTCP1P56278 107 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 EOGTQ5NDL2 527 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 HEPHL1Q6MZM0 1159 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 DPPA2Q7Z7J5 298 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PHOSPHO1Q8TCT1 267 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM106AQ96A25 262 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 C14orf79Q96F83 325 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 FBRSL1Q9HCM7 1045 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 BCL2L10Q9HD36 194 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PDE7BQ9NP56 450 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 B4GALT6Q9UBX8 382 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 LHX6Q9UPM6 363 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 HCFC1P51610 2035 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SOX1O00570 391 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CTSLP07711 333 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 RAB13P51153 203 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF791Q3KP31 576 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MFSD9Q8NBP5 474 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 OR10Z1Q8NGY1 313 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 M1APQ8TC57 530 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TMIGD2Q96BF3 282 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 LMLNQ96KR4 655 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TBX5Q99593 518 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 LYRM4Q9HD34 91 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 RPH3AQ9Y2J0 694 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CD14P08571 375 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GABRA3P34903 492 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM225Q6GV28 225 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 DUSP18Q8NEJ0 188 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SEH1LQ96EE3 360 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF75AQ96N20 296 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLIRPQ9GZT3 109 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 OR51I2Q9H344 312 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CYSLTR2Q9NS75 346 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MMACHCQ9Y4U1 282 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 OR5H14A6NHG9 310 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 HOXA1P49639 335 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PLCXD2Q0VAA5 305 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 YIPF6Q96EC8 236 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ARHGAP9Q9BRR9 750 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TRMT61BQ9BVS5 477 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF840PA6NDX5 716 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GPR171O14626 319 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CAMK2BQ13554 666 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CYP27C1Q4G0S4 372 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TEX261Q6UWH6 196 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SIAH3Q8IW03 269 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 IQCF1Q8N6M8 205 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 NPWQ8N729 165 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 FRMD1Q8N878 549 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 LPPQ93052 612 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLC25A44Q96H78 314 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TIMM29Q9BSF4 260 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF629Q9UEG4 869 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 U3KQ87 197 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 RFPL4AA6NLU0 287 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 RFPL4AL1F8VTS6 287 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 NID1P14543 1247 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ASCL1P50553 236 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CTF1Q16619 201 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MIDNQ504T8 468 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ABHD4Q8TB40 342 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SCMH1Q96GD3 660 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TXNDC17Q9BRA2 123 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLC39A9Q9NUM3 307 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF226Q9NYT6 803 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 INSL5Q9Y5Q6 135 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ARFGEF1Q9Y6D6 1849 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 NPIPB15A6NHN6 443 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ST8SIA3O43173 380 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TXNL1O43396 289 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 FBP1P09467 338 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 H2AFB1P0C5Y9 115 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ELAVL4P26378 380 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CCKARP32238 428 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GRINAQ7Z429 371 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLC41A2Q96JW4 573 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 C4orf36Q96KX1 117 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 UBQLN4Q9NRR5 601 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SIDT1Q9NXL6 827 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SLCO2B1O94956 709 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MAP3K3Q99759 626 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CSNK1G1Q9HCP0 422 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GPR173Q9NS66 373 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CSNK1G3Q9Y6M4 447 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GABRR3A8MPY1 467 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 MAS1P04201 325 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PSAPL1Q6NUJ1 521 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CMBLQ96DG6 245 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 WDR76Q9H967 626 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 STK17BO94768 372 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 EVX2Q03828 476 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms