RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 LOC102725191A0A1B0GVB3 256 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 TCRBV5S2A0A599 114 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 OR6C65A6NJZ3 312 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 ENO4A6NNW6 628 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 RAMP1O60894 148 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 DNAJC8O75937 253 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 PRSS23O95084 383 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 AKR7A3O95154 331 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 FABP3P05413 133 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 H1F0P07305 194 aaKnown RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 POU2F1P14859 743 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 FOSL1P15407 271 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 PPP3CBP16298 524 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 RAB6AP20340 208 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 COX5AP20674 150 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 UQCRC1P31930 480 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 CCKARP32238 428 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 RASSF2P50749 326 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 SMIM11AP58511 58 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 ZP4Q12836 540 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF74Q16587 644 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 MSMPQ1L6U9 139 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF474Q6S9Z5 364 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 H1FNTQ75WM6 255 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 SLC46A3Q7Z3Q1 461 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 LUZP2Q86TE4 346 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 DHFR2Q86XF0 187 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM99Q8N816 258 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 LIPHQ8WWY8 451 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 ACOT11Q8WXI4 607 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 APH1AQ96BI3 265 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 SLC25A36Q96CQ1 311 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 C14orf79Q96F83 325 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 C7orf34Q96L11 122 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 OXGR1Q96P68 337 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 PIP5K1AQ99755 562 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 BTBD10Q9BSF8 475 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 NDEL1Q9GZM8 345 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 LRMDAQ9H2I8 198 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 C12orf49Q9H741 205 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 KRCC1Q9NPI7 259 aaPredicted RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 MAN2C1Q9NTJ4 1040 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 KCNN3Q9UGI6 736 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM5Q9Y2B1 443 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 MED31Q9Y3C7 131 aa3.52□□□□□ -1.85
CNOT4-202ENST00000356162 FAM32AQ9Y421 112 aaKnown RBP3.52□□□□□ -1.85
CNOT4-202ENST00000356162 DOPEY2Q9Y3R5 2298 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 A0A1W2PRQ8 180 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 AQP12BA6NM10 295 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 J3KTA2 159 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 TRAF3IP2O43734 574 aaPredicted RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PIP5K1CO60331 668 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PEX14O75381 377 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 MT-ND1P03886 318 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PSMB1P20618 241 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 SSTR2P30874 369 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 MAGEA2P43356 314 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 SLC9A3P48764 834 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 SPIBQ01892 262 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 LTBQ06643 244 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PUDPQ08623 228 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PMS2P3Q13401 168 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PIN1Q13526 163 aaPredicted RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 DGCR6Q14129 220 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 TRIM25Q14258 630 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 GK3PQ14409 553 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 ANKDD1AQ495B1 522 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 C1QTNF12Q5T7M4 302 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 SP5Q6BEB4 398 aaPredicted RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PGM2L1Q6PCE3 622 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 Q6ZT83 130 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 MBOAT2Q6ZWT7 520 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 SSX8Q7RTT4 187 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PIWIL3Q7Z3Z3 882 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 HDDC2Q7Z4H3 204 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 NANOGNBQ7Z5D8 188 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 ABHD12BQ7Z5M8 362 aaPredicted RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 TSEN54Q7Z6J9 526 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 P3H2Q8IVL5 708 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 NKAIN4Q8IVV8 208 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 CCDC103Q8IW40 242 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 UEVLDQ8IX04 471 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 AQP12AQ8IXF9 295 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF100Q8IYN0 542 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 RNF113BQ8IZP6 322 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 C10orf53Q8N6V4 93 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 FAM86B1Q8N7N1 296 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF610Q8N9Z0 462 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 POMGNT2Q8NAT1 580 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 STEAP2Q8NFT2 490 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 PFN4Q8NHR9 129 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM255BQ8WV15 326 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 CCDC124Q96CT7 223 aaKnown RBP3.51□□□□□ -1.85
CNOT4-202ENST00000356162 DNAJA3Q96EY1 480 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 LRGUKQ96M69 825 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 MOGAT1Q96PD6 335 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF347Q96SE7 839 aa3.51□□□□□ -1.85
CNOT4-202ENST00000356162 THTPAQ9BU02 230 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms