RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 F5H5P2 479 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 HRKO00198 91 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 CTDSPLO15194 276 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 PPP3CBP16298 524 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SPI1P17947 270 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 MST1P26927 711 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 CMPK1P30085 196 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 MAT1AQ00266 395 aaKnown RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 LIN54Q6MZP7 749 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ARHGAP11AQ6P4F7 1023 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 PSRC1Q6PGN9 363 aaPredicted RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OVCH2Q7RTZ1 564 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SPICQ8N5J4 248 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OR2AK2Q8NG84 335 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SEC22AQ96IW7 307 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF75AQ96N20 296 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF578Q96N58 590 aaPredicted RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SLC38A3Q99624 504 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 PTDSS2Q9BVG9 487 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 WDR13Q9H1Z4 485 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 CPNE7Q9UBL6 633 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ACSL5Q9ULC5 683 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OR10H1Q9Y4A9 318 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SPTBN5Q9NRC6 3674 aaKnown RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 TRAV18A0A075B6X5 111 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 DCTN6O00399 190 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 PRICKLE3O43900 615 aaPredicted RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OR2A4O95047 310 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 CD3DP04234 171 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 FGF2P09038 288 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 C4BPBP20851 252 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 DLX5P56178 289 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ACTA2P62736 377 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ACTG2P63267 376 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 LTBQ06643 244 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 LRRN1Q6UXK5 716 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SFTPA2Q8IWL1 248 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 MFSD9Q8NBP5 474 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OR10K1Q8NGX5 313 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 PPP1R14AQ96A00 147 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 HHIPL1Q96JK4 782 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 LCORQ96JN0 433 aaPredicted RBP9.27□□□□□ -0.93
PTPRA-203ENST00000356147 OR2A7Q96R45 310 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 SLC7A5P2Q9GIP4 190 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 LDAHQ9H6V9 325 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 MED11Q9P086 117 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF281Q9Y2X9 895 aa9.27□□□□□ -0.93
PTPRA-203ENST00000356147 TRIOO75962 3097 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 A0A0B4J2E0 115 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 A0A1B0GX12 115 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 D6RAR5 112 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 M0QYG6 137 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 ACOT7O00154 380 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 RBBP9O75884 186 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 F13BP05160 661 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 LIPNQ5VXI9 398 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 FBXO42Q6P3S6 717 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 LEG1Q6P5S2 330 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 BIVMQ86UB2 503 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 FGF13Q92913 245 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 HAVCR1Q96D42 359 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 LMF1Q96S06 567 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 NPAS1Q99742 590 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 DPYSL5Q9BPU6 564 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF416Q9BWM5 594 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 PBX4Q9BYU1 374 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 EXO5Q9H790 373 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 TMEM185BQ9H7F4 350 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 AKAP7Q9P0M2 348 aaPredicted RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 TBC1D29Q9UFV1 150 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 LAMA1P25391 3075 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 DNASE2O00115 360 aaPredicted RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 B3GALNT1O75752 331 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 IGKV1D-16P01601 117 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 THBS1P07996 1170 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 CEBPEQ15744 281 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 TSSK4Q6SA08 328 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 LRRC69Q6ZNQ3 347 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 DND1Q8IYX4 353 aaKnown RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 NPEPL1Q8NDH3 523 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 PNPLA2Q96AD5 504 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 ADAD1Q96M93 576 aaKnown RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 PITHD1Q9GZP4 211 aaPredicted RBP9.26□□□□□ -0.93
PTPRA-203ENST00000356147 PLEKHA1Q9HB21 404 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 TAS2R3Q9NYW6 316 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 DAPP1Q9UN19 280 aa9.26□□□□□ -0.93
PTPRA-203ENST00000356147 KIAA0100Q14667 2235 aaKnown RBP9.25□□□□□ -0.93
PTPRA-203ENST00000356147 NDUFB2O95178 105 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 ADH1CP00326 375 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 CEACAM5P06731 702 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 CTSBP07858 339 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 SLC35G6P0C7Q6 338 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 CPN1P15169 458 aa9.25□□□□□ -0.93
PTPRA-203ENST00000356147 CDKN2AP42771 156 aaKnown RBP9.25□□□□□ -0.93
PTPRA-203ENST00000356147 DIO1P49895 249 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms