RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TSPAN31Q12999 210 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 AGERQ15109 404 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 MINDY4Q4G0A6 757 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 DCAF12L2Q5VW00 463 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 CCL4L1Q8NHW4 92 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 DIO2Q92813 273 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 SLC41A3Q96GZ6 507 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 KXD1Q9BQD3 176 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 PIGQQ9BRB3 760 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 ADAM29Q9UKF5 820 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 WDR45Q9Y484 360 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR6C76A6NM76 312 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 H0Y8X5 98 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 SNAPINO95295 136 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 THY1P04216 161 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 SFTPCP11686 197 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 PSMB1P20618 241 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 BDKRB2P30411 391 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RAP2BP61225 183 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RPE65Q16518 533 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 C4orf46Q504U0 113 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 FIGNL1Q6PIW4 674 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RPTNQ6XPR3 784 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 NDUFAF7Q7L592 441 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 GDF7Q7Z4P5 450 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OAFQ86UD1 273 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR10H4Q8NGA5 316 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 ISOC2Q96AB3 205 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 MICU1Q9BPX6 476 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 HDAC8Q9BY41 377 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 TLNRD1Q9H1K6 362 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 BCL2L10Q9HD36 194 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 EXOSC3Q9NQT5 275 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 PCDHGA5Q9Y5G8 931 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 PCDHGA1Q9Y5H4 931 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 SEC16AO15027 2179 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 S100A8P05109 93 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CEACAM5P06731 702 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 EN2P19622 333 aaPredicted RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 ADH6P28332 368 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RBMS1P29558 406 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 OMPP47874 163 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 SRSF3P84103 164 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 TPBGQ13641 420 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 PEA15Q15121 130 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 TMEM35AQ53FP2 167 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 GLT8D1Q68CQ7 371 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 ZC3H14Q6PJT7 736 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 KLHL36Q8N4N3 616 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CYB561A3Q8NBI2 242 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR51Q1Q8NH59 317 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RAB7BQ96AH8 199 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CDCA3Q99618 268 aaPredicted RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 FGF22Q9HCT0 170 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 FBXO34Q9NWN3 711 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 DTX4Q9Y2E6 619 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 AK6Q9Y3D8 172 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR14I1A6ND48 311 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RAD1O60671 282 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 LDB3O75112 727 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 GYPBP06028 91 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CD2P06729 351 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 PRF1P14222 555 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CD53P19397 219 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 STAT5AP42229 794 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RAB2AP61019 212 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 RUNX3Q13761 415 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 TRMT12Q53H54 448 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 HBMQ6B0K9 141 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR7E24Q6IFN5 339 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 MAMDC2Q7Z304 686 aaPredicted RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 SIRT6Q8N6T7 355 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR11G2Q8NGC1 345 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 OR2L8Q8NGY9 312 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 C20orf24Q9BUV8 137 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 TEX101Q9BY14 249 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 CACYBPQ9HB71 228 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 THAP10Q9P2Z0 257 aaPredicted RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
SMG6-202ENST00000354901 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
SMG6-202ENST00000354901 A0A0A6YYC8 382 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 TMEM129A0AVI4 362 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 F5H5P2 479 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 I3L1I5 382 aaPredicted RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 STK25O00506 426 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CLN5O75503 358 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 SLC25A12O75746 678 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CMPK1P30085 196 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 P2RY4P51582 365 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 NR0B1P51843 470 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 TRA2BP62995 288 aaKnown RBP8.6□□□□□ -1.03
SMG6-202ENST00000354901 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 LINC00303Q3SY05 128 aa8.6□□□□□ -1.03
SMG6-202ENST00000354901 CD300LDQ6UXZ3 194 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms