RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SERTAD3Q9UJW9 196 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM184BQ9Y519 407 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SPACA6W5XKT8 324 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 A0A1W2PPK0 400 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 A0A1W2PS29 197 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 G3V3Q6 166 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF749O43361 778 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 B4GALT2O60909 372 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 KCNK5O95279 499 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 FARS2O95363 451 aaKnown RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 NBL1P41271 181 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 FABP5Q01469 135 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ACY1Q03154 408 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 HLXQ14774 488 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 BTN2A1Q7KYR7 527 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 TCEANCQ8N8B7 351 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 OR10H5Q8NGA6 315 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 OR4K14Q8NGD5 310 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SPATA5L1Q9BVQ7 753 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 TAPBPLQ9BX59 468 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 RNF32Q9H0A6 362 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 FAM212BQ9NTI7 297 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SEMA4GQ9NTN9 838 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 CLN6Q9NWW5 311 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 FTSJ1Q9UET6 329 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ACSL6Q9UKU0 697 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SCN3AQ9NY46 2000 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF705EA8MWA4 302 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 TERTO14746 1132 aaKnown RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SNAPINO95295 136 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 MPIP34949 423 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 EVX1P49640 407 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 VEGFCP49767 419 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 NCBP2P52298 156 aaKnown RBP eCLIP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 PDX1P52945 283 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 CSNK2BP67870 215 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 IGLV3-21P80748 117 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SHC2P98077 582 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ATXN7L3Q14CW9 347 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF750Q32MQ0 723 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF730Q6ZMV8 503 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 PTOV1Q86YD1 416 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 NAXDQ8IW45 347 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 SFXN5Q8TD22 340 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 RFT1Q96AA3 541 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ANKRD9Q96BM1 317 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-203ENST00000354674 LURAP1Q96LR2 239 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 BBS4Q96RK4 519 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 EDEM2Q9BV94 578 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF780BQ9Y6R6 833 aa9.25□□□□□ -0.93
SYNE1-203ENST00000354674 PQLC2LA1A4F0 135 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 OR2T1O43869 369 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RP2O75695 350 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RNH1P13489 461 aaKnown RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 NFYAP23511 347 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RFC3P40938 356 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ETV5P41161 510 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 PLA1AQ53H76 456 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 FAM27D1Q5T7N8 215 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SIAH3Q8IW03 269 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ZSCAN1Q8NBB4 408 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 OR52B4Q8NGK2 314 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 PIGQQ9BRB3 760 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 GINS4Q9BRT9 223 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SCP2D1Q9UJQ7 156 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SAMD4AQ9UPU9 718 aaKnown RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CLDN16Q9Y5I7 305 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CCDC88CQ9P219 2028 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 FGF17O60258 216 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ERAL1O75616 437 aaKnown RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 GPR75O95800 540 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ATP1B1P05026 303 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SFTPCP11686 197 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 NPR2P20594 1047 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 KDELR2P33947 212 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 NPBWR1P48145 328 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SPEM2Q0P670 501 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 HSPB3Q12988 150 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 COX20Q5RI15 118 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 AVPI1Q5T686 147 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 MARCH9Q86YJ5 346 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF595Q8IYB9 648 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 LRRC25Q8N386 305 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RCBTB1Q8NDN9 531 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 MOAP1Q96BY2 351 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CMTM3Q96MX0 182 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 DPAGT1Q9H3H5 408 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM38AQ9H6F2 299 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 PARD6AQ9NPB6 346 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RALGAPA1Q6GYQ0 2036 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ONECUT2O95948 504 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CPMP14384 443 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 CELP19835 753 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 OR2B8PP59922 312 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms