RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 CIB4A0PJX0 185 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 VWC2LB2RUY7 222 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 AKAP10O43572 662 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 CCNKO75909 580 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
RTN3-204ENST00000354497 VENTXO95231 258 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 TSPAN8P19075 237 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 NR4A1P22736 598 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 IGHV1-2P23083 117 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 OPRL1P41146 370 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 FOXF1Q12946 379 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 HEPACAMQ14CZ8 416 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 RSBN1Q5VWQ0 802 aaPredicted RBP9.84□□□□□ -0.83
RTN3-204ENST00000354497 CREB3L2Q70SY1 520 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 RPS27LQ71UM5 84 aaKnown RBP9.84□□□□□ -0.83
RTN3-204ENST00000354497 ZNF100Q8IYN0 542 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 UBE2J2Q8N2K1 259 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 TEX47Q8TBZ9 253 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 FBXO17Q96EF6 278 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 CLPTM1LQ96KA5 538 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 ARL5BQ96KC2 179 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 MNTQ99583 582 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 C1QTNF6Q9BXI9 259 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 EBPLQ9BY08 206 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 MYNNQ9NPC7 610 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 EQTNQ9NQ60 294 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 VPS29Q9UBQ0 182 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 PCTPQ9UKL6 214 aa9.84□□□□□ -0.83
RTN3-204ENST00000354497 ZNF98A6NK75 572 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 OR5H1A6NKK0 313 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 NDUFS8O00217 210 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 NOS1APO75052 506 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 NUDT14O95848 222 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 IGKV1D-16P01601 117 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 C2P06681 752 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 HPGDP15428 266 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 PTAFRP25105 342 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 CD40P25942 277 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 MAGEA4P43358 317 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 OR3A2P47893 321 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 MANFP55145 182 aaKnown RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 NME5P56597 212 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 POU6F2P78424 691 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 MLC1Q15049 377 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 TMEM176BQ3YBM2 270 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 INTS11Q5TA45 600 aaKnown RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 PXDC1Q5TGL8 231 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 MROH9Q5TGP6 573 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 UBE2UQ5VVX9 321 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 C16orf89Q6UX73 402 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 ANKFN1Q8N957 763 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 RHOXF1Q8NHV9 184 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 FBXO30Q8TB52 745 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 GPR151Q8TDV0 419 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 C16orf78Q8WTQ4 265 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 MZB1Q8WU39 189 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 GCDHQ92947 438 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 FOXN4Q96NZ1 517 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 VRK1Q99986 396 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 KLHDC3Q9BQ90 382 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 INPP5KQ9BT40 448 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 SOX7Q9BT81 388 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 CHID1Q9BWS9 393 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 BTBD2Q9BX70 525 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 BHLHE41Q9C0J9 482 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 PPA2Q9H2U2 334 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 CXorf36Q9H7Y0 433 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 BRF2Q9HAW0 419 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 RPRD1BQ9NQG5 326 aaKnown RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 POLE3Q9NRF9 147 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 KLHL9Q9P2J3 617 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 TMEFF2Q9UIK5 374 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 PCDHGB4Q9UN71 923 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 C19orf53Q9UNZ5 99 aaPredicted RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 PCDHGB5Q9Y5G0 923 aa9.83□□□□□ -0.84
RTN3-204ENST00000354497 YLPM1P49750 1951 aaKnown RBP9.83□□□□□ -0.84
RTN3-204ENST00000354497 A0A087WV62 115 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 A0A096LPK6 155 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 C7orf72A4D263 438 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 LRP5LA4QPB2 252 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 GJE1A6NN92 205 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 UPK1AO00322 258 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 UPK1BO75841 260 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 AVPP01185 164 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 IGHV3-9P01782 118 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZNF182P17025 639 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 EDNRAP25101 427 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ERP29P30040 261 aaKnown RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 SERPINB5P36952 375 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RNF144AP50876 292 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 CD83Q01151 205 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ZFP69Q49AA0 526 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 GTDC1Q4AE62 458 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 GGTA1PQ4G0N0 100 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 PDLIM3Q53GG5 364 aaPredicted RBP9.82□□□□□ -0.84
RTN3-204ENST00000354497 GPR107Q5VW38 600 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 RHOUQ7L0Q8 258 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 SSX8Q7RTT4 187 aa9.82□□□□□ -0.84
RTN3-204ENST00000354497 ADCK1Q86TW2 530 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms