RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CRMP1Q14194 572 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 OR1Q1Q15612 314 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 TRAM1Q15629 374 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 COL28A1Q2UY09 1125 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MRPL2Q5T653 305 aaKnown RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 FAM69BQ5VUD6 431 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SHISA6Q6ZSJ9 500 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 COX15Q7KZN9 410 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 RANBP3LQ86VV4 465 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 PRSS58Q8IYP2 241 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 OR4N2Q8NGD1 307 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 ADAMTS14Q8WXS8 1223 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 THAP4Q8WY91 577 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SMPDL3BQ92485 455 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 DPCDQ9BVM2 203 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-204ENST00000353317 CDCP1Q9H5V8 836 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 BEX1Q9HBH7 125 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 KCNE5Q9UJ90 142 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 SIGLEC7Q9Y286 467 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 NPFFR2Q9Y5X5 522 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 AHCTF1Q8WYP5 2266 aa7.85□□□□□ -1.15
TRIM55-204ENST00000353317 MEIKINA0A087WXM9 373 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 NPIPA5A0A0B4J1W7 369 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 RPS10-NUDT3A0A1W2PQS6 291 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 GXYLT2A0PJZ3 443 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SYNDIG1LA6NDD5 238 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 TRABD2BA6NFA1 517 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 NPIPA7E9PJI5 369 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 PEX12O00623 359 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 NTN3O00634 580 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CTNSO60931 367 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 LYPD3O95274 346 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 HPXP02790 462 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CLPSP04118 112 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SLC35E2P0CK97 266 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 NPIPA8P0DM63 369 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SULT1A3P0DMM9 295 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SULT1A4P0DMN0 295 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SAGP10523 405 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 EPXP11678 715 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF250P15622 560 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 DRD5P21918 477 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF81P51508 661 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZP1P60852 638 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 EXOSC2Q13868 293 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 GPR139Q6DWJ6 353 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 FAAH2Q6GMR7 532 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 LUZP2Q86TE4 346 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZSCAN1Q8NBB4 408 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 OR51A7Q8NH64 312 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 BPIFA2Q96DR5 249 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 AUNIPQ9H7T9 357 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 MEPEQ9NQ76 525 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 PRTFDC1Q9NRG1 225 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 PTTG3PQ9NZH4 202 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 COPZ2Q9P299 210 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CTSFQ9UBX1 484 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SPEF1Q9Y4P9 236 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZFHX4Q86UP3 3567 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 G3V3Q6 166 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 H0YIG0 161 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 I3L521 148 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF593O00488 134 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 TOXO94900 526 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 RCBTB2O95199 551 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CFDP00746 253 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 THBS1P07996 1170 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 H2AFB2P0C5Z0 115 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CCL4P13236 92 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 DNASE1P24855 282 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 EMDP50402 254 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 NRG3P56975 720 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 TAS2R43P59537 309 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SNTB2Q13425 540 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 KLF9Q13886 244 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 TMPRSS11FQ6ZWK6 438 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 IZUMO1Q8IYV9 350 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 RNF113BQ8IZP6 322 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CARFQ8N187 725 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 PIAS4Q8N2W9 510 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 MS4A15Q8N5U1 240 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 TEX19Q8NA77 164 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SUMF1Q8NBK3 374 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 OR52R1Q8NGF1 315 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 DACT3Q96B18 629 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF350Q9GZX5 532 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CCDC86Q9H6F5 360 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 CACYBPQ9HB71 228 aaKnown RBP7.84□□□□□ -1.15
TRIM55-204ENST00000353317 ST6GALNAC2Q9UJ37 374 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 SLC35A3Q9Y2D2 325 aa7.84□□□□□ -1.15
TRIM55-204ENST00000353317 DCHS1Q96JQ0 3298 aa7.84□□□□□ -1.16
TRIM55-204ENST00000353317 A8MUA0 341 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 LRRN3E7EW58 273 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 GALR2O43603 387 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SSNA1O43805 119 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms