RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FANCFQ9NPI8 374 aa12.37□□□□□ -0.43
SEC13-202ENST00000350697 NPDC1Q9NQX5 325 aaPredicted RBP12.37□□□□□ -0.43
SEC13-202ENST00000350697 STX18Q9P2W9 335 aaKnown RBP12.37□□□□□ -0.43
SEC13-202ENST00000350697 PLEKHB1Q9UF11 243 aaPredicted RBP12.37□□□□□ -0.43
SEC13-202ENST00000350697 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
SEC13-202ENST00000350697 TMEM5Q9Y2B1 443 aa12.37□□□□□ -0.43
SEC13-202ENST00000350697 NOX1Q9Y5S8 564 aa12.37□□□□□ -0.43
SEC13-202ENST00000350697 HECTD1Q9ULT8 2610 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ANKHD1Q8IWZ3 2542 aaKnown RBP12.36□□□□□ -0.43
SEC13-202ENST00000350697 SH3PXD2BA1X283 911 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 HPRP00739 348 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 SAGP10523 405 aaPredicted RBP12.36□□□□□ -0.43
SEC13-202ENST00000350697 AHCYP23526 432 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 GRNP28799 593 aaKnown RBP12.36□□□□□ -0.43
SEC13-202ENST00000350697 UQCRC1P31930 480 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 NTF4P34130 210 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 PCYT1AP49585 367 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ERFP50548 548 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 HMGA2P52926 109 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ZP4Q12836 540 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 RCN1Q15293 331 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 SEC23BQ15437 767 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 OR2T5Q6IEZ7 315 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 CASP12Q6UXS9 341 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 BEND4Q6ZU67 534 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 TMPRSS11FQ6ZWK6 438 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 PXKQ7Z7A4 578 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 OR4K5Q8NGD3 323 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 OR2T29Q8NH02 315 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 APH1AQ96BI3 265 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 RSRC1Q96IZ7 334 aaKnown RBP12.36□□□□□ -0.43
SEC13-202ENST00000350697 ALPK1Q96QP1 1244 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 CCM2LQ9NUG4 571 aaPredicted RBP12.36□□□□□ -0.43
SEC13-202ENST00000350697 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ELOVL5Q9NYP7 299 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 TAS2R5Q9NYW4 299 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 LYVE1Q9Y5Y7 322 aa12.36□□□□□ -0.43
SEC13-202ENST00000350697 ALPK2Q86TB3 2170 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 EFCAB9A8MZ26 197 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 TNFRSF11BO00300 401 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
SEC13-202ENST00000350697 MAKP20794 623 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 CD79BP40259 229 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 LIMS1P48059 325 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 SLC9A3P48764 834 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
SEC13-202ENST00000350697 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 ANKDD1AQ495B1 522 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 AAED1Q7RTV5 226 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 KIF18BQ86Y91 864 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
SEC13-202ENST00000350697 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 VCX3BQ9H321 246 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 REEP1Q9H902 201 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 RCE1Q9Y256 329 aa12.35□□□□□ -0.43
SEC13-202ENST00000350697 PKDREJQ9NTG1 2253 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 C11orf98E9PRG8 122 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 RNF13O43567 381 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 TRAF3IP2O43734 574 aaPredicted RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 AKAP8O43823 692 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 OR10H3O60404 316 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 CST1P01037 141 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 HLA-DOBP13765 273 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 POU2F1P14859 743 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 EDNRAP25101 427 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 IFNGR2P38484 337 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 PEX19P40855 299 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 GPR4P46093 362 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 OMPP47874 163 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 CLDN17P56750 224 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 RPS4XP62701 263 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 SORDQ00796 357 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 CCNIQ14094 377 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 SP5Q6BEB4 398 aaPredicted RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 Q6ZT83 130 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 OAFQ86UD1 273 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 MEX3DQ86XN8 651 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 SLCO4A1Q96BD0 722 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 FAM46AQ96IP4 442 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 HIF3AQ9Y2N7 669 aa12.34□□□□□ -0.43
SEC13-202ENST00000350697 SAMHD1Q9Y3Z3 626 aaKnown RBP12.34□□□□□ -0.43
SEC13-202ENST00000350697 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 CDC42EP2O14613 210 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 SERPINI2O75830 405 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 ZNF432O94892 652 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 IGFBP2P18065 325 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 AQP2P41181 271 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 FAM27E3Q08E93 113 aa12.33□□□□□ -0.44
SEC13-202ENST00000350697 GK3PQ14409 553 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms