RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 RASL10BQ96S79 203 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 DCLRE1CQ96SD1 692 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CNN2Q99439 309 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CMKLR1Q99788 373 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MROQ9BYG7 248 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ULBP3Q9BZM4 244 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 NUAK2Q9H093 628 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MARCH7Q9H992 704 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SMURF1Q9HCE7 757 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CPNE5Q9HCH3 593 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 TRIM36Q9NQ86 728 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 KLHL1Q9NR64 748 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 DLL3Q9NYJ7 618 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MRPL39Q9NYK5 338 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 NCDNQ9UBB6 729 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 PLEKHB1Q9UF11 243 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GPN3Q9UHW5 284 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ST6GALNAC2Q9UJ37 374 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GSTK1Q9Y2Q3 226 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 PTRH2Q9Y3E5 179 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 UGT2A1Q9Y4X1 527 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 PCDHGB7Q9Y5F8 929 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 HS3ST3B1Q9Y662 390 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ADAMTS9Q9P2N4 1935 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 HEATR5AQ86XA9 2040 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SHISA3A0PJX4 238 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ISPDA4D126 451 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NPIPB13A6NJU9 1138 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 C4orf47A7E2U8 309 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NPIPB4C9JG80 1138 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 PLPP3O14495 311 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 CTDSP2O14595 271 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OR2T1O43869 369 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 EFNA2O43921 213 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SLC25A12O75746 678 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 UPK1BO75841 260 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 RGS9O75916 674 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OR2J2O76002 312 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 AHSA1O95433 338 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NUDT14O95848 222 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 IGHEP01854 428 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 HIST1H2ABP04908 130 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 F13BP05160 661 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 CD63P08962 238 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MRPL3P09001 348 aaKnown RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 RAB40ALP0C0E4 278 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TNFSF8P32971 234 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 S100A5P33763 92 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SDC2P34741 201 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 APOBEC1P41238 236 aaKnown RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NBL1P41271 181 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 CASP3P42574 277 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SLC16A1P53985 500 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OR12D2P58182 307 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ACTA2P62736 377 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ACTG2P63267 376 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 E2F1Q01094 437 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 KRR1Q13601 381 aaKnown RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MFSD13AQ14CX5 517 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OXA1LQ15070 435 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TRAM1Q15629 374 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 C11orf91Q3C1V1 193 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 EEF1A1P5Q5VTE0 462 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 FAM69BQ5VUD6 431 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 LEG1Q6P5S2 330 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NHLRC1Q6VVB1 395 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 DCDC5Q6ZRR9 648 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 HIST3H2AQ7L7L0 130 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SLC16A9Q7RTY1 509 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 PXKQ7Z7A4 578 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 JAZF1Q86VZ6 243 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MARCH9Q86YJ5 346 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TIGD4Q8IY51 512 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 CENPSQ8N2Z9 138 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 RFLNBQ8N5W9 214 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 PARP16Q8N5Y8 322 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 FADS6Q8N9I5 356 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TEX19Q8NA77 164 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SYT14Q8NB59 555 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OR2M3Q8NG83 312 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 OR10G3Q8NGC4 313 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MFSD8Q8NHS3 518 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF519Q8TB69 540 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 POC1BQ8TC44 478 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 THAP3Q8WTV1 239 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 HIST1H2ACQ93077 130 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 RNF166Q96A37 237 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 PELI1Q96FA3 418 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 C4orf36Q96KX1 117 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 MRGPRX4Q96LA9 322 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 PGLYRP3Q96LB9 341 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 TBX5Q99593 518 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 SDHCQ99643 169 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-203ENST00000350034 NPAS1Q99742 590 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ZPBPQ9BS86 351 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 ALG12Q9BV10 488 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 DDA1Q9BW61 102 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 DEFB126Q9BYW3 111 aa6.25□□□□□ -1.41
TRIM55-203ENST00000350034 POTEKPQ9BYX7 375 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms