RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CYCSP99999 105 aaKnown RBP13.58□□□□□ -0.23
NUP50-201ENST00000347635 FGL2Q14314 439 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 LPAL2Q16609 132 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 ZNF680Q8NEM1 530 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 OR13H1Q8NG92 308 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.23
NUP50-201ENST00000347635 MBNL1Q9NR56 388 aaKnown RBP13.58□□□□□ -0.23
NUP50-201ENST00000347635 ACOXLQ9NUZ1 547 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 CA5BQ9Y2D0 317 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 PLEKHM1Q9Y4G2 1056 aa13.58□□□□□ -0.23
NUP50-201ENST00000347635 APOC1P02654 83 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 GPR139Q6DWJ6 353 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 RFPL4BQ6ZWI9 263 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 GPAT4Q86UL3 456 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ANGPTL6Q8NI99 470 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ARHGDIGQ99819 225 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ZNF304Q9HCX3 659 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 KCND3Q9UK17 655 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 MAOBP27338 520 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 GPLD1P80108 840 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 TRMT12Q53H54 448 aaKnown RBP13.58□□□□□ -0.24
NUP50-201ENST00000347635 SYT13Q7L8C5 426 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 OR9A4Q8NGU2 314 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 CRB3Q9BUF7 120 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ELOVL3Q9HB03 270 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ZNF701Q9NV72 531 aaPredicted RBP13.58□□□□□ -0.24
NUP50-201ENST00000347635 A0A0D9SG52 128 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 AGAP14A8MT82 685 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 P2RX6O15547 441 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 P2RX3P56373 397 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 VAMP2P63027 116 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.24
NUP50-201ENST00000347635 ZNF628Q5EBL2 1059 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ZBTB37Q5TC79 503 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 ASB17Q8WXJ9 295 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 SEMA6CQ9H3T2 930 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 MCCC2Q9HCC0 563 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 REV1Q9UBZ9 1251 aa13.58□□□□□ -0.24
NUP50-201ENST00000347635 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 TPOP07202 933 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 GIPP09681 153 aaPredicted RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 SLC2A5P22732 501 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 TAS2R31P59538 309 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 DCAF7P61962 342 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 GLO1Q04760 184 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 CDKN3Q16667 212 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 OR13C5Q8NGS8 318 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 CPNE2Q96FN4 548 aaPredicted RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 MRGPRX1Q96LB2 322 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SLC6A18Q96N87 628 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SLC23A2Q9UGH3 650 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 STEAP1Q9UHE8 339 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SYT7O43581 403 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 HLA-AP01891 365 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 C1QCP02747 245 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SEMG1P04279 462 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 ANXA7P20073 488 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 ADH6P28332 368 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 HCCSP53701 268 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 FAM122CQ6P4D5 195 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 ZNF454Q8N9F8 522 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 OR4Q3Q8NH05 313 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 OR52I2Q8NH67 350 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 TMEM106AQ96A25 262 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 TLCD2A6NGC4 264 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 MAKP20794 623 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 RNLSQ5VYX0 342 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 HEPHL1Q6MZM0 1159 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 CYSLTR2Q9NS75 346 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 C19orf53Q9UNZ5 99 aaPredicted RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 SERINC4A6NH21 518 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SYNGR4O95473 234 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 LIPCP11150 499 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 PCBP4P57723 403 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 RAB5BP61020 215 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 TEX261Q6UWH6 196 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 PRR22Q8IZ63 422 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 BOLLQ8N9W6 283 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 OR6N1Q8NGY5 312 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SCARB1Q8WTV0 552 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 BARHL1Q9BZE3 327 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SLC38A1Q9H2H9 487 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 UBQLN4Q9NRR5 601 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SLC23A1Q9UHI7 598 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 U3KQ87 197 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 TOR2AQ5JU69 321 aa13.57□□□□□ -0.24
NUP50-201ENST00000347635 SNIP1Q8TAD8 396 aaKnown RBP13.57□□□□□ -0.24
NUP50-201ENST00000347635 CD300LFQ8TDQ1 290 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms