RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 WDR45Q9Y484 360 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PCDHGA5Q9Y5G8 931 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 HEATR5BQ9P2D3 2071 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 TRBV2A0A0J9YWF9 115 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 RFPL4AA6NLU0 287 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 RFPL4AL1F8VTS6 287 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 PRICKLE3O43900 615 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-202ENST00000347617 MAKP20794 623 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 EDNRAP25101 427 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 PDX1P52945 283 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 CLDN2P57739 230 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 STARD6P59095 220 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 AMZ1Q400G9 498 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 PTCRAQ6ISU1 281 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-202ENST00000347617 RPTNQ6XPR3 784 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF793Q6ZN11 406 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 DGLUCYQ7Z3D6 616 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 OR13C5Q8NGS8 318 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 GIMAP5Q96F15 307 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 MFFQ9GZY8 342 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 PIGMQ9H3S5 423 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 LMAN1LQ9HAT1 526 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 WSB2Q9NYS7 404 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-202ENST00000347617 NTNG1Q9Y2I2 539 aa14.54□□□□□ -0.08
HMGA1-202ENST00000347617 ARPC4-TTLL3A0A0A6YYG9 625 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 A0A1W2PR48 441 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 TCRBV16S1A1N1A0A5B0 115 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 PCP4L1A6NKN8 68 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 RASGRP1O95267 797 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 NTN1O95631 604 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 AIFM1O95831 613 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 IGHV4-34P06331 123 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 MC3RP41968 323 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 CBFBQ13951 182 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 PWWP2BQ6NUJ5 590 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 TSSK4Q6SA08 328 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 GLB1L2Q8IW92 636 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 AMER3Q8N944 861 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 LINC01555Q8NAE3 123 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 OR6N1Q8NGY5 312 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 SYNPRQ8TBG9 265 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 CCDC107Q8WV48 283 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 ZG16BQ96DA0 208 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 BPIFA2Q96DR5 249 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 SLC35A4Q96G79 324 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 RBM18Q96H35 190 aaKnown RBP14.53□□□□□ -0.08
HMGA1-202ENST00000347617 ORAI3Q9BRQ5 295 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 TWSG1Q9GZX9 223 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 PCED1AQ9H1Q7 454 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 UPB1Q9UBR1 384 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 SERTAD3Q9UJW9 196 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF281Q9Y2X9 895 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 PLEKHM1Q9Y4G2 1056 aa14.53□□□□□ -0.08
HMGA1-202ENST00000347617 TNRC18O15417 2968 aaPredicted RBP14.53□□□□□ -0.08
HMGA1-202ENST00000347617 RAB19A4D1S5 217 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 POM121CA8CG34 1229 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 NUPL2O15504 423 aaKnown RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 CTNSO60931 367 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 RBBP9O75884 186 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 KDM4BO94953 1096 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 LYPD3O95274 346 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 MELTFP08582 738 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF35P13682 527 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 IL9P15248 144 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 RPS4Y1P22090 263 aaKnown RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 MC2RQ01718 297 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 CRMP1Q14194 572 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF345Q14585 488 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 OR1Q1Q15612 314 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 TP53I3Q53FA7 332 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SLC35D3Q5M8T2 416 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 MFSD12Q6NUT3 480 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ABHD17CQ6PCB6 329 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF613Q6PF04 617 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 MOB3CQ70IA8 216 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 FCRLAQ7L513 359 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 RAB11FIP2Q7L804 512 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 NRROSQ86YC3 692 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SLC35F2Q8IXU6 374 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 C2orf73Q8N5S3 287 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ACOT4Q8N9L9 421 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 OR2L5Q8NG80 312 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 OR2A1Q8NGT9 310 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SNX33Q8WV41 574 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 OR14A2Q96R54 314 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 CDX2Q99626 313 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SLC19A3Q9BZV2 496 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 SAV1Q9H4B6 383 aaPredicted RBP14.52□□□□□ -0.08
HMGA1-202ENST00000347617 NOX4Q9NPH5 578 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 PRDM7Q9NQW5 492 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 GPR27Q9NS67 375 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 ACTR10Q9NZ32 417 aa14.52□□□□□ -0.08
HMGA1-202ENST00000347617 OR5K4A6NMS3 321 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 NUDT19A8MXV4 375 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 H7C417 338 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 GLSO94925 669 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-202ENST00000347617 PLATP00750 562 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 RBM34P42696 430 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms