RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TEAD3Q99594 435 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 SERPINA7P05543 415 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 MMP2P08253 660 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 IGFBP1P08833 259 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 SNU13P55769 128 aaKnown RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 MALLQ13021 153 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 ZNF266Q14584 549 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 FBXW12Q6X9E4 464 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 RBMS3Q6XE24 437 aaKnown RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 ABHD12BQ7Z5M8 362 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 IGLV3-10A0A075B6K4 115 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 LGI1O95970 557 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 SBK2P0C263 348 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 FBLP22087 321 aaKnown RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 DLX2Q07687 328 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 TTLL10Q6ZVT0 673 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 RBM45Q8IUH3 476 aaKnown RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 MS4A8Q9BY19 250 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 SPATA6Q9NWH7 488 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 C9J4A7 227 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 ZNF28P17035 718 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 HTRA4P83105 476 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 ZNF852Q6ZMS4 543 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 PTOV1Q86YD1 416 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 ZDHHC12Q96GR4 267 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 TAS2R5Q9NYW4 299 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 FLVCR2Q9UPI3 526 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 A0A1B0GUL6 1792 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 OR2C1O95371 312 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 NKG7Q16617 165 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 MACROD1Q9BQ69 325 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 GLIPR2Q9H4G4 154 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 ZMAT5Q9UDW3 170 aaKnown RBP16.73■□□□□ 0.27
SMC4-201ENST00000344722 SOD1P00441 154 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 TIMP2P16035 220 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 RAB1AP62820 205 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 C1orf87Q8N0U7 546 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 NMNAT3Q96T66 252 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 KCNIP1Q9NZI2 227 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 ECI1P42126 302 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 MMP15P51511 669 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 RBM39Q14498 530 aaKnown RBP16.73■□□□□ 0.27
SMC4-201ENST00000344722 OPN5Q6U736 354 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 CALHM3Q86XJ0 350 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 RAB22AQ9UL26 194 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 CACNA1SQ13698 1873 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 OR5H14A6NHG9 310 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 PRR35P0CG20 571 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 MAKP20794 623 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 CASRP41180 1078 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 EXOSC7Q15024 291 aaKnown RBP16.73■□□□□ 0.27
SMC4-201ENST00000344722 ZNF74Q16587 644 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
SMC4-201ENST00000344722 TMEM99Q8N816 258 aa16.73■□□□□ 0.27
SMC4-201ENST00000344722 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
SMC4-201ENST00000344722 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 ZNF593O00488 134 aaPredicted RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 TNFSF12O43508 249 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 ZNF43P17038 809 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 SSTP61278 116 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 WDR88Q6ZMY6 472 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 OR2AK2Q8NG84 335 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 RBMXL1Q96E39 390 aaKnown RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 CERS4Q9HA82 394 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMC4-201ENST00000344722 SPHK1Q9NYA1 384 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 CSAG2Q9Y5P2 127 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 CCSO14618 274 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 LDB3O75112 727 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 RAC2P15153 192 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 TAS2R30P59541 319 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 CNN3Q15417 329 aaKnown RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 SKA3Q8IX90 412 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 NKAIN3Q8N8D7 197 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 KCNG3Q8TAE7 436 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 OR1F2PQ96R84 312 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 PRDX1Q06830 199 aaKnown RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 TMEM88Q6PEY1 159 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 FAM160A2Q8N612 972 aaPredicted RBP16.72■□□□□ 0.27
SMC4-201ENST00000344722 TMEM59Q9BXS4 323 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 CBLCQ9ULV8 474 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 LILRB5O75023 590 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 ITGB7P26010 798 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 C19orf57Q0VDD7 668 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 KIR2DS3Q14952 304 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 EOGTQ5NDL2 527 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 OR52E1Q8NGJ3 308 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 C20orf24Q9BUV8 137 aa16.72■□□□□ 0.27
SMC4-201ENST00000344722 CNMDO75829 334 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 PSMB5P28074 263 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 LMX1AQ8TE12 382 aa16.71■□□□□ 0.27
SMC4-201ENST00000344722 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
SMC4-201ENST00000344722 ASB1Q9Y576 335 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms