RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 GABRR3A8MPY1 467 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 PRSS36Q5K4E3 855 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 ALKBH2Q6NS38 261 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 CBLN2Q8IUK8 224 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 PCDHB10Q9UN67 800 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 C11orf98E9PRG8 122 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 PDX1P52945 283 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 HYAL4Q2M3T9 481 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 MEX3BQ6ZN04 569 aaKnown RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 CPNE4Q96A23 557 aaPredicted RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 MS4A4EQ96PG1 132 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 TCRBV16S1A1N1A0A5B0 115 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 J3KTA2 159 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 RAD1O60671 282 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 NDUFB2O95178 105 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 RFX2P48378 723 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 PRPS1P60891 318 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 SIRPAP78324 504 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 CDK5Q00535 292 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 RANBP10Q6VN20 620 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 NIPSNAP1Q9BPW8 284 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 GLULP15104 373 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 GABRA3P34903 492 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 KDELR3O43731 214 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 STPG2Q8N412 459 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 RSC1A1Q92681 617 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 MPC1LP0DKB6 136 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 CLDN12P56749 244 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 NHLH2Q02577 135 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 UMODL1-AS1Q8N2C9 162 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 GPR137Q96N19 417 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 NOX4Q9NPH5 578 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 SPATA6Q9NWH7 488 aaPredicted RBP12.69□□□□□ -0.38
TRIO-202ENST00000344204 IER3IP1Q9Y5U9 82 aa12.69□□□□□ -0.38
TRIO-202ENST00000344204 HMSDA8MTL9 139 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 H2AFB1P0C5Y9 115 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 FOXO1Q12778 655 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR2G3Q8NGZ4 309 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR14L1PQ8NHC6 308 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 RBP7Q96R05 134 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 STEAP1Q9UHE8 339 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 GNB3P16520 340 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ACHEP22303 614 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TPPP2P59282 170 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ATPAF1Q5TC12 328 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 WDR89Q96FK6 387 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ATOH8Q96SQ7 321 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR51I2Q9H344 312 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 COL1A1P02452 1464 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 AK1P00568 194 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 CCDC116Q8IYX3 515 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR2AK2Q8NG84 335 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.389e-10■■□□□ 14.5
TRIO-202ENST00000344204 SLC2A9Q9NRM0 540 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 CASRP41180 1078 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR4K14Q8NGD5 310 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TANKQ92844 425 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PLEKHJ1Q9NW61 149 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 LATO43561 262 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TACR3P29371 465 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PSMB3P49720 205 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PLAGL1Q9UM63 463 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 MEIKINA0A087WXM9 373 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 DRD2P14416 443 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ZNF273Q14593 569 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 LRRC25Q8N386 305 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 GDI1P31150 447 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 GRM7Q14831 915 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TMEM31Q5JXX7 168 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PHOSPHO1Q8TCT1 267 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 ABT1Q9ULW3 272 aaKnown RBP12.68□□□□□ -0.38
TRIO-202ENST00000344204 KCNK5O95279 499 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 KLHDC1Q8N7A1 406 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 DLL4Q9NR61 685 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms