RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ARMC4Q5T2S8 1044 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 POMZP3Q6PJE2 187 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 LRRC17Q8N6Y2 441 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 MDS2Q8NDY4 140 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 KTI12Q96EK9 354 aaPredicted RBP13.27□□□□□ -0.28
CXCL12-201ENST00000343575 ST6GAL2Q96JF0 529 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 UTP23Q9BRU9 249 aaKnown RBP13.27□□□□□ -0.28
CXCL12-201ENST00000343575 TRAF4Q9BUZ4 470 aaPredicted RBP13.27□□□□□ -0.28
CXCL12-201ENST00000343575 SLC19A3Q9BZV2 496 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 IL20Q9NYY1 176 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 SIGLEC7Q9Y286 467 aa13.27□□□□□ -0.28
CXCL12-201ENST00000343575 FREM3P0C091 2139 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 TMED7-TICAM2A0A0A6YYA0 188 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 CCRL2O00421 344 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 ZIC3O60481 467 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 CEACAM4O75871 244 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 RFPL3SP0C7P2 107 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 POU1F1P28069 291 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 C21orf33P30042 268 aaPredicted RBP13.27□□□□□ -0.29
CXCL12-201ENST00000343575 POLR2HP52434 150 aaKnown RBP13.27□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF620Q6ZNG0 422 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 LIX1LQ8IVB5 337 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 OR13C2Q8NGS9 318 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 TMEM234Q8WY98 164 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 MOGAT1Q96PD6 335 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 PTDSS2Q9BVG9 487 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 DKK4Q9UBT3 224 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 TMED7Q9Y3B3 224 aa13.27□□□□□ -0.29
CXCL12-201ENST00000343575 M0R129 80 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 SUSD5O60279 629 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 SLC25A12O75746 678 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 IGF2P01344 180 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 PIPP12273 146 aaPredicted RBP13.26□□□□□ -0.29
CXCL12-201ENST00000343575 CNR1P21554 472 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 CXCR1P25024 350 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 CDK5Q00535 292 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 MFAP5Q13361 173 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 ACSM5Q6NUN0 579 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 IQCF1Q8N6M8 205 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 OR4K17Q8NGC6 315 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 OR1J4Q8NGS1 313 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 UBL7Q96S82 380 aaPredicted RBP13.26□□□□□ -0.29
CXCL12-201ENST00000343575 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
CXCL12-201ENST00000343575 CHCHD6Q9BRQ6 235 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 TMEM246Q9BRR3 403 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 OR11A1Q9GZK7 315 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 SLC22A4Q9H015 551 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 OR51E2Q9H255 320 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 SMURF1Q9HCE7 757 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 QPCTLQ9NXS2 382 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 TMEM5Q9Y2B1 443 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 CSAG2Q9Y5P2 127 aa13.26□□□□□ -0.29
CXCL12-201ENST00000343575 TRAV27A0A087WT01 109 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 UNC119BA6NIH7 251 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 H3BN98 237 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 CH25HO95992 272 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 GIPRP48546 466 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 SCN1BQ07699 218 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF74Q16587 644 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 IGFL2Q6UWQ7 119 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 THSD4Q6ZMP0 1018 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 NOXA1Q86UR1 476 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 SPACA3Q8IXA5 215 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 HAS2Q92819 552 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 SGTBQ96EQ0 304 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TNFRSF13CQ96RJ3 184 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 CENPOQ9BU64 300 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 RNF32Q9H0A6 362 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 UBQLN3Q9H347 655 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ABI3Q9P2A4 366 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 MGAQ8IWI9 3026 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TPD52L2O43399 206 aaKnown RBP13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ADRB1P08588 477 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 GABRB1P18505 474 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TNFSF8P32971 234 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 EIF2S3P41091 472 aaKnown RBP13.25□□□□□ -0.29
CXCL12-201ENST00000343575 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ID4P47928 161 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF41P51814 821 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-201ENST00000343575 RUNX1T1Q06455 604 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ASAH1Q13510 395 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 YIF1BQ5BJH7 314 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 C12orf73Q69YU5 71 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 OR51A7Q8NH64 312 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 RELTQ969Z4 430 aa13.25□□□□□ -0.29
CXCL12-201ENST00000343575 ARL5BQ96KC2 179 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms