RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 PLK5Q496M5 336 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 PARS2Q7L3T8 475 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 NIPSNAP1Q9BPW8 284 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 NRIP3Q9NQ35 241 aa11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
SEMA6A-202ENST00000343348 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 CPMP14384 443 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 OPRD1P41143 372 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM31Q5JXX7 168 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 LILRA2Q8N149 483 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM58AQ8N1B3 248 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 CLEC1AQ8NC01 280 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 RLN3Q8WXF3 142 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 NKX3-1Q99801 234 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 CHD4Q14839 1912 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 MCRIP1C9JLW8 97 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 FZD9O00144 591 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SELENOFO60613 162 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 PRAMEF4O60810 478 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 KCNJ10P78508 379 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ARHGAP11BQ3KRB8 267 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 Q6ZTK2 550 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 MMP21Q8N119 569 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 OR1E3Q8WZA6 343 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ANKRD19PQ9H560 264 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SCG5P05408 212 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 THBS1P07996 1170 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 HBQ1P09105 142 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 GIPRP48546 466 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 STEAP1BQ6NZ63 245 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF852Q6ZMS4 543 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC43A2Q8N370 569 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TRAF3IP2O43734 574 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM111BQ6SJ93 734 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 KRBOX1C9JBD0 128 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ARNTLO00327 626 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC6A11P48066 632 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ASB17Q8WXJ9 295 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 CALHM2Q9HA72 323 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 PSORS1C1Q9UIG5 152 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 V9GYS6 101 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 H3BNC9 293 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TFAP2AP05549 437 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 AADACP22760 399 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 DPP4P27487 766 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 HCCSP53701 268 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 SIRPAP78324 504 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 CAMK2BQ13554 666 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 RBMS3Q6XE24 437 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 RFLNAQ6ZTI6 216 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 YIPF5Q969M3 257 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 PIGTQ969N2 578 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TVP23CQ96ET8 276 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM231Q9H6L2 316 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
SEMA6A-202ENST00000343348 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 A0A087WZY1 265 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 C1SP09871 688 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TACR1P25103 407 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 EIF2DP41214 584 aaKnown RBP11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TSPAN31Q12999 210 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 CLVS2Q5SYC1 327 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 HACD4Q5VWC8 232 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 NKAIN2Q5VXU1 208 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 RNF141Q8WVD5 230 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TOE1Q96GM8 510 aaKnown RBP11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TMEM212A6NML5 194 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 NME2P1O60361 137 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TACR3P29371 465 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 PIGAP37287 484 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 TMUB2Q71RG4 321 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 NAA40Q86UY6 237 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 RASD2Q96D21 266 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 DHRS4Q9BTZ2 278 aa11.27□□□□□ -0.6
SEMA6A-202ENST00000343348 OR52A5Q9H2C5 316 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms