RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 MEPEQ9NQ76 525 aaPredicted RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 MRPL39Q9NYK5 338 aaKnown RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 RCE1Q9Y256 329 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 PLPP3O14495 311 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 PLAUP00749 431 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 HEXAP06865 529 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 HLA-DOBP13765 273 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 NCK1P16333 377 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 ZNF43P17038 809 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 FUT4P22083 530 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 CLDN17P56750 224 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 TAS2R41P59536 307 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 FXNQ16595 210 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 NIPAL3Q6P499 406 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 TTC33Q6PID6 262 aaPredicted RBP13.52□□□□□ -0.25
VAPA-201ENST00000340541 C20orf204Q6ZNR8 217 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 P2RY8Q86VZ1 359 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 FITM2Q8N6M3 262 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 BDH2Q9BUT1 245 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 ASPNQ9BXN1 380 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 NPAP1Q9NZP6 1156 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 UPB1Q9UBR1 384 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 A4GNTQ9UNA3 340 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 SNX13Q9Y5W8 968 aa13.52□□□□□ -0.25
VAPA-201ENST00000340541 NSD1Q96L73 2696 aaPredicted RBP13.51□□□□□ -0.25
VAPA-201ENST00000340541 KPNA4O00629 521 aaPredicted RBP13.51□□□□□ -0.25
VAPA-201ENST00000340541 GSTA4O15217 222 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 TMCC2O75069 709 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 UPK3AO75631 287 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 CH25HO95992 272 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 SERPINA1P01009 418 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 THRBP10828 461 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
VAPA-201ENST00000340541 MPGP29372 298 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 UGT2B15P54855 530 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 NR1H2P55055 460 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 PUDPQ08623 228 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 PMS2P3Q13401 168 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 PPA1Q15181 289 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 STK11Q15831 433 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 NCMAPQ5T1S8 102 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 C9orf135Q5VTT2 229 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 ALKBH2Q6NS38 261 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 SLC46A3Q7Z3Q1 461 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 TSEN54Q7Z6J9 526 aaKnown RBP13.51□□□□□ -0.25
VAPA-201ENST00000340541 WDFY1Q8IWB7 410 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 PGAM4Q8N0Y7 254 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 TMEM123Q8N131 208 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 C10orf53Q8N6V4 93 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 WDR31Q8NA23 367 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 C1orf162Q8NEQ5 155 aaPredicted RBP13.51□□□□□ -0.25
VAPA-201ENST00000340541 TMEM255BQ8WV15 326 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 LZICQ8WZA0 190 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 BOD1Q96IK1 185 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 SMR3AQ99954 134 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 SLC25A15Q9Y619 301 aa13.51□□□□□ -0.25
VAPA-201ENST00000340541 CIB4A0PJX0 185 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 DPRXA6NFQ7 191 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 FFAR1O14842 300 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ZNF682O95780 498 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 MT-ND1P03886 318 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ASAH2BP0C7U1 165 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 RBM34P42696 430 aaKnown RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 SLC25A3Q00325 362 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 C1DQ13901 141 aaKnown RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 KRT72Q14CN4 511 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 Q5PR19 223 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ZNF704Q6ZNC4 412 aaPredicted RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 PXKQ7Z7A4 578 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 UEVLDQ8IX04 471 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 FAM156AQ8NDB6 213 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 OR5J2Q8NH18 312 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 PFN4Q8NHR9 129 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 TXNDC15Q96J42 360 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 HSH2DQ96JZ2 352 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ALKBH3Q96Q83 286 aaPredicted RBP13.5□□□□□ -0.25
VAPA-201ENST00000340541 OR2M2Q96R28 347 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 FKRPQ9H9S5 495 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 MAN2C1Q9NTJ4 1040 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 C20orf141Q9NUB4 165 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 TAS2R5Q9NYW4 299 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 CD300AQ9UGN4 299 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 EGFL7Q9UHF1 273 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms