RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 POU4F2Q12837 409 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 CCDC157Q569K6 752 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 LIPNQ5VXI9 398 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 SLC35D2Q76EJ3 337 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TMED4Q7Z7H5 227 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 SLC25A38Q96DW6 304 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 FAM60AQ9NP50 221 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF281Q9Y2X9 895 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ITGA10O75578 1167 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 COL9A1P20849 921 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GRK6P43250 576 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 PTH2RP49190 550 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ART1P52961 327 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 MAZP56270 477 aaKnown RBP13.17□□□□□ -0.3
CPSF7-201ENST00000340437 ULK3Q6PHR2 472 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 DPY19L4Q7Z388 723 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 TAF8Q7Z7C8 310 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OOSP2Q86WS3 158 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 OR5AK2Q8NH90 309 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 NKD1Q969G9 470 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 WDR92Q96MX6 357 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GFI1Q99684 422 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
CPSF7-201ENST00000340437 CEP250Q9BV73 2442 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CDC14CA4D256 554 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 C17orf51A8MQB3 221 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CREBL2O60519 120 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-201ENST00000340437 SC5DO75845 299 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 KDM4BO94953 1096 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 DIO1P49895 249 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 P2RX1P51575 399 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 LRRC37A5PQ49AS3 106 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ARMC6Q6NXE6 501 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-201ENST00000340437 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 AVL9Q8NBF6 648 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ZNF563Q8TA94 476 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 RLN3Q8WXF3 142 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 NSMAFQ92636 917 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 B8ZZF3 427 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 GOSR2O14653 212 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ILF3Q12906 894 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 21.5
CPSF7-201ENST00000340437 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CA13Q8N1Q1 262 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CHRNA9Q9UGM1 479 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 DCTN6O00399 190 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 PDCD5O14737 125 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 OGG1O15527 345 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 SPDEFO95238 335 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CXCL2P19875 107 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 AP3S2P59780 193 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 CBFBQ13951 182 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ATXN7L3Q14CW9 347 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-201ENST00000340437 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 OR4D10Q8NGI6 311 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 RSC1A1Q92681 617 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 MICU1Q9BPX6 476 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 C14orf105Q9NVL8 296 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 LAMP5Q9UJQ1 280 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 ENTPD2Q9Y5L3 495 aa13.16□□□□□ -0.3
CPSF7-201ENST00000340437 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 LINC00862A6NCI5 91 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 CYR61O00622 381 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 GLB1L2Q8IW92 636 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
CPSF7-201ENST00000340437 NPEPL1Q8NDH3 523 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.3
CPSF7-201ENST00000340437 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-201ENST00000340437 APBB3O95704 486 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 GTF2F2P13984 249 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 MAP2K6P52564 334 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 ITPRIPL2Q3MIP1 535 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 STAC2Q6ZMT1 411 aa13.15□□□□□ -0.3
CPSF7-201ENST00000340437 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms