RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 IGHMP01871 453 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 SDHAP31040 664 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 P2RY4P51582 365 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 CLDN15P56746 228 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 CTXN1P60606 82 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 ISL1P61371 349 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 IL5RAQ01344 420 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 POU4F3Q15319 338 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 ACSM5Q6NUN0 579 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 GHDCQ8N2G8 530 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 Q8NA96 180 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 WBP1Q96G27 269 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 GPR137Q96N19 417 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 OXGR1Q96P68 337 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 ERMAPQ96PL5 475 aaPredicted RBP13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 PRDM14Q9GZV8 571 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 TVP23BQ9NYZ1 205 aa13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
NIPAL3-202ENST00000339255 C11orf98E9PRG8 122 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 H0YC42 278 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 MS4A18H0YCH9 400 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 SURF4O15260 269 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 CXCL13O43927 109 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 TXNDC12O95881 172 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 F13BP05160 661 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF3P17036 446 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
NIPAL3-202ENST00000339255 HSF1Q00613 529 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
NIPAL3-202ENST00000339255 PDK3Q15120 406 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 MS4A18Q3C1V0 323 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 SLC25A30Q5SVS4 291 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 ADCK1Q86TW2 530 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 UEVLDQ8IX04 471 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 EXD3Q8N9H8 876 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 FBLIM1Q8WUP2 373 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 WDYHV1Q96HA8 205 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 TXNIPQ9H3M7 391 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 FN3KQ9H479 309 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 PNPLA3Q9NST1 481 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 LUZP4Q9P127 313 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 GRHPRQ9UBQ7 328 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 KLHL21Q9UJP4 597 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 MCTS1Q9ULC4 181 aaKnown RBP13□□□□□ -0.33
NIPAL3-202ENST00000339255 RNF6Q9Y252 685 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 ADAM18Q9Y3Q7 739 aa13□□□□□ -0.33
NIPAL3-202ENST00000339255 A6NIZ1 184 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 SMAD9O15198 467 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 SYNGR4O95473 234 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 RAP1BP61224 184 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 RAP1AP62834 184 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ERVK-25P63136 954 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 POU3F1Q03052 451 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 SRYQ05066 204 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 SF3B4Q15427 424 aaKnown RBP eCLIP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 MEDAGQ5VYS4 303 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF324BQ6AW86 544 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 FAM122BQ7Z309 247 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ENTHD1Q8IYW4 607 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 FAM26EQ8N5C1 309 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 TMEM163Q8TC26 289 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 FAR1Q8WVX9 515 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 Q96MT0 163 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 B3GAT1Q9P2W7 334 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF175Q9Y473 711 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 IER3IP1Q9Y5U9 82 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 XKRYO14609 159 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 FCGR2AP12318 317 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF43P17038 809 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 RPL27P61353 136 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 EFNB1P98172 346 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 CD47Q08722 323 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 C1DQ13901 141 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ACKR1Q16570 336 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ABLIM2Q6H8Q1 611 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 ARIH2OSQ8N7S6 290 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 NR1H4Q96RI1 486 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 UCN2Q96RP3 112 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 UBAP1Q9NZ09 502 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 CAMK2AQ9UQM7 478 aa12.99□□□□□ -0.33
NIPAL3-202ENST00000339255 TEX13CA0A0J9YWL9 993 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SH3D21A4FU49 640 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 SNTNA6NMZ2 147 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 AKAP8O43823 692 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-202ENST00000339255 PRKYO43930 277 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms