RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 PRKAR1BP31321 381 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 PSMA6P60900 246 aaKnown RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 ARHGAP11BQ3KRB8 267 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 FHL5Q5TD97 284 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 ATRAIDQ6UW56 229 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 LINGO2Q7L985 606 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 NAXDQ8IW45 347 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 MFRPQ9BY79 579 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 SLC6A15Q9H2J7 730 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 FBXO34Q9NWN3 711 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 AKAP7Q9P0M2 348 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF69Q9UC07 566 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 ST6GALNAC2Q9UJ37 374 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 FBXL2Q9UKC9 423 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 SPTBP11277 2137 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 ECDO95905 644 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 AGR2O95994 175 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 SBK2P0C263 348 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 CT62P0C5K7 136 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 GABRA1P14867 456 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 RAB3AP20336 220 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 PYCR1P32322 319 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 SEC61A1P61619 476 aaKnown RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 MCATQ8IVS2 390 aaKnown RBP17.18■□□□□ 0.34
PSPC1-201ENST00000338910 MEIOBQ8N635 442 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 OR52I2Q8NH67 350 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 OR1S1Q8NH92 325 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 FAM174AQ8TBP5 190 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 LMX1AQ8TE12 382 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 NOX3Q9HBY0 568 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 PCDHB16Q9NRJ7 776 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 TAS2R5Q9NYW4 299 aa17.18■□□□□ 0.34
PSPC1-201ENST00000338910 UNC119BA6NIH7 251 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 TEX46H3BTG2 121 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ATXN8OSP0DMR3 200 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 FUT1P19526 365 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF169Q14929 603 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 STK11Q15831 433 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF626Q68DY1 528 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 APOOLQ6UXV4 268 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 LNX2Q8N448 690 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ARL14Q8N4G2 192 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 C19orf47Q8N9M1 422 aaKnown RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF671Q8TAW3 534 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 FANK1Q8TC84 345 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 SMAP2Q8WU79 429 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 THEM6Q8WUY1 208 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 HSPA12BQ96MM6 686 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 CMTM3Q96MX0 182 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ADGRL4Q9HBW9 690 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 GPR160Q9UJ42 338 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 SLC7A7Q9UM01 511 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF443Q9Y2A4 671 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 A0A0A6YYC8 382 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 I3L1I5 382 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 CREBL2O60519 120 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 NME1P15531 152 aaKnown RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 AP3S2P59780 193 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 B2MP61769 119 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ELOCQ15369 112 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 PRICKLE4Q2TBC4 344 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 NHLRC1Q6VVB1 395 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 TMUB2Q71RG4 321 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 CADM4Q8NFZ8 388 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 OR52L1Q8NGH7 329 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 ANKRD9Q96BM1 317 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 GUCD1Q96NT3 240 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 DPH1Q9BZG8 443 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 PRDM9Q9NQV7 894 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 PRDM6Q9NQX0 595 aa17.17■□□□□ 0.34
PSPC1-201ENST00000338910 AK6Q9Y3D8 172 aaKnown RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 KLF2Q9Y5W3 355 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-201ENST00000338910 NPIPA5A0A0B4J1W7 369 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 HMSDA8MTL9 139 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 NPIPA7E9PJI5 369 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 GABARAPH6UMI1 98 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 DNASE2O00115 360 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SELENOFO60613 162 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SERPINA3P01011 423 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 HIST1H2ABP04908 130 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 NPIPA8P0DM63 369 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SLC16A1P53985 500 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF836Q6ZNA1 936 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 DGAT2L6Q6ZPD8 337 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 HIST3H2AQ7L7L0 130 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SPEM1Q8N4L4 309 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 HIST1H2ACQ93077 130 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 UTP23Q9BRU9 249 aaKnown RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 OR51V1Q9H2C8 321 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 CACYBPQ9HB71 228 aaKnown RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ZMAT5Q9UDW3 170 aaKnown RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ARPC5O15511 151 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ARL6IP5O75915 188 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 LDOC1O95751 146 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 UCHL1P09936 223 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 PPP3CBP16298 524 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ANXA7P20073 488 aaKnown RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 FAM199XQ6PEV8 388 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms