RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 HS3ST1O14792 307 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 IFNA14P01570 189 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 PSME3P61289 254 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 SELENOWP63302 87 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 ZNF74Q16587 644 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 ADAM5Q6NVV9 412 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 C20orf204Q6ZNR8 217 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 NKAIN4Q8IVV8 208 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 C1orf162Q8NEQ5 155 aaPredicted RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 AKAP1Q92667 903 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRKN-201ENST00000338468 MUCL1Q96DR8 90 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 ALKBH3Q96Q83 286 aaPredicted RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 OR2M2Q96R28 347 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 LINC00470Q9BZP3 86 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 ALG2Q9H553 416 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 SLC17A5Q9NRA2 495 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 BEX4Q9NWD9 120 aaPredicted RBP13.38□□□□□ -0.27
PRKN-201ENST00000338468 RNF115Q9Y4L5 304 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 KPNA4O00629 521 aaPredicted RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 OR5F1O95221 314 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 CH25HO95992 272 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 CD3EP07766 207 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 UGT2B15P54855 530 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 SLC46A3Q7Z3Q1 461 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 VTCN1Q7Z7D3 282 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 C17orf78Q8N4C9 275 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 WFDC11Q8NEX6 87 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 KBTBD8Q8NFY9 601 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 TXNDC15Q96J42 360 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 TPD52L3Q96J77 140 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 PIP5K1AQ99755 562 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 ASPNQ9BXN1 380 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 POLR2J2Q9GZM3 115 aaKnown RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
PRKN-201ENST00000338468 NELFAQ9H3P2 528 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 ARL8BQ9NVJ2 186 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 RIMS3Q9UJD0 308 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 A4GNTQ9UNA3 340 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 SNX13Q9Y5W8 968 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 DSCAMO60469 2012 aa13.37□□□□□ -0.27
PRKN-201ENST00000338468 JMJD1CQ15652 2540 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 OR6C65A6NJZ3 312 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 SHISA9B4DS77 424 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 ZNF587BE7ETH6 402 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 CLOCKO15516 846 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 ASAH2BP0C7U1 165 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 NCK1P16333 377 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 CDH2P19022 906 aaPredicted RBP13.36□□□□□ -0.27
PRKN-201ENST00000338468 HOXC12P31275 282 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 ZNF83P51522 516 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 TAS2R41P59536 307 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 POU3F1Q03052 451 aaPredicted RBP13.36□□□□□ -0.27
PRKN-201ENST00000338468 PUDPQ08623 228 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 HIKESHIQ53FT3 197 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 CBLL1Q75N03 491 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 UEVLDQ8IX04 471 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 ZNF611Q8N823 705 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 OR5J2Q8NH18 312 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 PFN4Q8NHR9 129 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 TMEM255BQ8WV15 326 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
PRKN-201ENST00000338468 CCL19Q99731 98 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 SMR3AQ99954 134 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 FKRPQ9H9S5 495 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 MED29Q9NX70 200 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 FAM53CQ9NYF3 392 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 TAS2R5Q9NYW4 299 aa13.36□□□□□ -0.27
PRKN-201ENST00000338468 RPL36A-HNRNPH2H7BZ11 118 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 FFAR1O14842 300 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 SLC43A1O75387 559 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 INHBBP09529 407 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 RBM34P42696 430 aaKnown RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKN-201ENST00000338468 IL1RL1Q01638 556 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
PRKN-201ENST00000338468 TGFBR3Q03167 851 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 SPOCK1Q08629 439 aa13.35□□□□□ -0.27
PRKN-201ENST00000338468 ZP4Q12836 540 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms