RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CRLF2Q9HC73 371 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 INTS9Q9NV88 658 aaKnown RBP11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 MED29Q9NX70 200 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 KLHL14Q9P2G3 628 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
NUDCD3-201ENST00000338427 A0A087WUJ7 227 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 EVPLLA8MZ36 301 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 AIM2O14862 343 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC43A1O75387 559 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 SERPINI2O75830 405 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 THY1P04216 161 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ATP4BP51164 291 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 EFNA4P52798 201 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 CHRNB3Q05901 458 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 NPTX1Q15818 432 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 TMEM249Q2WGJ8 235 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 FAM69AQ5T7M9 428 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ULK3Q6PHR2 472 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 CLEC2AQ6UVW9 174 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ABHD12BQ7Z5M8 362 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 KRT73Q86Y46 540 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ARMC8Q8IUR7 673 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 C10orf53Q8N6V4 93 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 C10orf105Q8TEF2 133 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 FAM168AQ92567 244 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC47A1Q96FL8 570 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 MCHR1Q99705 422 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF385DQ9H6B1 395 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 TMEM38AQ9H6F2 299 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 NOX3Q9HBY0 568 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 PMF1-BGLAPU3KQ54 211 aa11.61□□□□□ -0.55
NUDCD3-201ENST00000338427 ARPC4-TTLL3A0A0A6YYG9 625 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 A0A1B0GX12 115 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 TMEM129A0AVI4 362 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 SH3PXD2BA1X283 911 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC35F4A4IF30 521 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 H7C417 338 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 OR2T1O43869 369 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 LYPD3O95274 346 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 F12P00748 615 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 OR4A8P0C604 315 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CBR1P16152 277 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 PPIBP23284 216 aaKnown RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 THBS4P35443 961 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 SERPINF1P36955 418 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 IDH3GP51553 393 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 PIGFQ07326 219 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 PMS2P3Q13401 168 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CAMK2DQ13557 499 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CARTPTQ16568 116 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 WDR88Q6ZMY6 472 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 DHDDSQ86SQ9 333 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 MDP1Q86V88 176 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 HIPK1Q86Z02 1210 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 GPR137CQ8N3F9 429 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 ARIH2OSQ8N7S6 290 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 OR6T1Q8NGN1 323 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 DNAJA4Q8WW22 397 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 SLC41A3Q96GZ6 507 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 ANKRD27Q96NW4 1050 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 FOXN4Q96NZ1 517 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 ZNF607Q96SK3 696 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CGREF1Q99674 301 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 SPATA5L1Q9BVQ7 753 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CA10Q9NS85 328 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 USP22Q9UPT9 525 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 NDUFAF1Q9Y375 327 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 GMEB1Q9Y692 573 aa11.6□□□□□ -0.55
NUDCD3-201ENST00000338427 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 A8MV72 311 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 C11orf98E9PRG8 122 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 FZD7O75084 574 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 SERPINB7O75635 380 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 IGLV1-44P01699 117 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 HLA-HP01893 362 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 CRYAAP02489 173 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 IGFBP1P08833 259 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 PATE4P0C8F1 98 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 NQO1P15559 274 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 AHCYP23526 432 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 CAPZA2P47755 286 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 GZMMP51124 257 aa11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 PCBP3P57721 371 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 LOXL1Q08397 574 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-201ENST00000338427 NPRL3Q12980 569 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms