RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GIMAP5Q96F15 307 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 DOK1Q99704 481 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 URM1Q9BTM9 101 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FBXO8Q9NRD0 319 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 KCND3Q9UK17 655 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NACAE9PAV3 2078 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SELENOFO60613 162 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CER1O95813 267 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MSX1P28360 303 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 KMT5CQ86Y97 462 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CADM4Q8NFZ8 388 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NARS2Q96I59 477 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MCCC2Q9HCC0 563 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PLEKHA6Q9Y2H5 1048 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NOP16Q9Y3C1 178 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NOX1Q9Y5S8 564 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CLDN12P56749 244 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 EEF1A2Q05639 463 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 RNASE10Q5GAN6 216 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 P4HA3Q7Z4N8 544 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FAM46BQ96A09 425 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TSSK2Q96PF2 358 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TBC1D24Q9ULP9 559 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CACNG2Q9Y698 323 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM269A0A1B0GVZ9 245 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CT62P0C5K7 136 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PCMT1P22061 227 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PLP2Q04941 152 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MRPL49Q13405 166 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OXA1LQ15070 435 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TCEAL6Q6IPX3 200 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NIPAL3Q6P499 406 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SLC16A12Q6ZSM3 486 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 GRINAQ7Z429 371 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF584Q8IVC4 421 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CCDC36Q8IYA8 594 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR4D11Q8NGI4 311 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR5D14Q8NGL3 314 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NUDT15Q9NV35 164 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NDUFB11Q9NX14 153 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PISDQ9UG56 409 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 UGT2A1Q9Y4X1 527 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 HEATR5BQ9P2D3 2071 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MAGEB4O15481 346 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 RLN2P04090 185 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 GALNT6Q8NCL4 622 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR14A2Q96R54 314 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CTRCQ99895 268 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PCDHB16Q9NRJ7 776 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 RBFOX1Q9NWB1 397 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ANXA3P12429 323 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 HCCSP53701 268 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SLC26A5P58743 744 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CASTOR1Q8WTX7 329 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MED11Q9P086 117 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF28P17035 718 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 DNASE1P24855 282 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PPP1CAP62136 330 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 LSM11P83369 360 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 E2F1Q01094 437 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF628Q5EBL2 1059 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NLGN4YQ8NFZ3 816 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SLC25A46Q96AG3 418 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF587Q96SQ5 575 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NXT1Q9UKK6 140 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FXYD6-FXYD2A0A087WZ82 144 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 APOC1P02654 83 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PNLIPRP2P54317 469 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 DUSP2Q05923 314 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 GPR137CQ8N3F9 429 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 DNAJC5GQ8N7S2 189 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR5J2Q8NH18 312 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FAM71F1Q96KD3 344 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FXYD6Q9H0Q3 95 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PLEK2Q9NYT0 353 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CES1P1Q9UKY3 287 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PADI1Q9ULC6 663 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 GATBO75879 557 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 DPP4P27487 766 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 C1orf140Q5VVS0 124 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SFTPA2Q8IWL1 248 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR8H3Q8N146 312 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 OR51D1Q8NGF3 324 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NEDD4LQ96PU5 975 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 MTCH2Q9Y6C9 303 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 RAB40ALP0C0E4 278 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 NME1P15531 152 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 CSNK1A1P48729 337 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 THOC7Q6I9Y2 204 aaKnown RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 RAB40AQ8WXH6 277 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 BCL2L14Q9BZR8 327 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SYNPO2LQ9H987 977 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 B4GALT7Q9UBV7 327 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 PFDN2Q9UHV9 154 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 FZD7O75084 574 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 TCN2P20062 427 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 EMDP50402 254 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CSNK2A1P68400 391 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 FGFBP1Q14512 234 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms