RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ATP13A2Q9NQ11 1180 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SDHAF3Q9NRP4 125 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 BABAM2Q9NXR7 383 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 MKL2Q9ULH7 1088 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 RBMX2Q9Y388 322 aaKnown RBP4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 SPAG17Q6Q759 2223 aa4.83□□□□□ -1.64
PRPF4B-201ENST00000337659 NPIPA2E9PIF3 369 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ZIC3O60481 467 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PGA4P0DJD7 388 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PGA3P0DJD8 388 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 CEACAM1P13688 526 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF3P17036 446 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 NR4A2P43354 598 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DSCR4P56555 118 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 RPL27P61353 136 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DCTN2Q13561 401 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 GPR68Q15743 365 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 VWA2Q5GFL6 755 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PAMR1Q6UXH9 720 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 HDDC2Q7Z4H3 204 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TMPRSS12Q86WS5 348 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 BEST3Q8N1M1 668 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 KLHL36Q8N4N3 616 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 OR52J3Q8NH60 311 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ST7LQ8TDW4 575 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNRF4Q8WWF5 429 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 KCNE4Q8WWG9 221 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ADAMTS14Q8WXS8 1223 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 REPIN1Q9BWE0 567 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TEX12Q9BXU0 123 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DPH1Q9BZG8 443 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TBL1XR1Q9BZK7 514 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF107Q9UII5 783 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TRBV23OR9-2A0A075B6M9 112 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 A0A1W2PPW3 197 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 KHNYNO15037 678 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TRAPPC2P0DI81 140 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TRAPPC2BP0DI82 140 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 IFI30P13284 250 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 HIST1H1CP16403 213 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 OR1D4P47884 311 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 BMXP51813 675 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DGUOKQ16854 277 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 AHSA2Q719I0 299 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 P3H2Q8IVL5 708 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ESX1Q8N693 406 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 EID2Q8N6I1 236 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 AMER2Q8N7J2 671 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ABHD17AQ96GS6 310 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 MOGAT1Q96PD6 335 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 GFI1Q99684 422 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ATF6BQ99941 703 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 FAIMQ9NVQ4 179 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SELENONQ9NZV5 590 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DHCR7Q9UBM7 475 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 CLEC2DQ9UHP7 191 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TMED7-TICAM2A0A0A6YYA0 188 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TEX13CA0A0J9YWL9 993 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 OR6C68A6NDL8 312 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PRR32B1ATL7 298 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TRAF3IP2O43734 574 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SDC3O75056 442 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 FADS2O95864 444 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 IFNGP01579 166 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 GKN3PP0CG01 181 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ALOX5APP20292 161 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DHPSP49366 369 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 EMP2P54851 167 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 CDH11P55287 796 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PPP1R8Q12972 351 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 YIF1BQ5BJH7 314 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 C1orf140Q5VVS0 124 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 IGFL3Q6UXB1 125 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 WDFY1Q8IWB7 410 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 BBS1Q8NFJ9 593 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 OR52L1Q8NGH7 329 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 RGP1Q92546 391 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 C10orf35Q96D05 121 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TNFRSF13CQ96RJ3 184 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 FAM86C1Q9NVL1 165 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SOHLH2Q9NX45 425 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 ING1Q9UK53 422 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TCFL5Q9UL49 500 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 RASD1Q9Y272 281 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 TMED7Q9Y3B3 224 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 PEX16Q9Y5Y5 336 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SIRT4Q9Y6E7 314 aaPredicted RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SPTBN1Q01082 2364 aaKnown RBP4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 DOPEY2Q9Y3R5 2298 aa4.82□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC22A23A1A5C7 686 aa4.81□□□□□ -1.64
PRPF4B-201ENST00000337659 MAN1A2O60476 641 aa4.81□□□□□ -1.64
PRPF4B-201ENST00000337659 RGS9O75916 674 aaPredicted RBP4.81□□□□□ -1.64
PRPF4B-201ENST00000337659 IGHG3P01860 377 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms