RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 KLF4O43474 513 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 TNFSF14O43557 240 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 GALR3O60755 368 aaPredicted RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 SOX30O94993 753 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 THEGLP0DJG4 465 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 EMDP50402 254 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 PGDP52209 483 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 BTG2P78543 158 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 FAM53BQ14153 422 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 HAGHLQ6PII5 290 aaPredicted RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 OR1F2PQ96R84 312 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 C20orf85Q9H1P6 137 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 CCDC86Q9H6F5 360 aaKnown RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 TAS2R3Q9NYW6 316 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 TRAPPC13A5PLN9 417 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 CDHR4A6H8M9 788 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 ARPC1BO15143 372 aaKnown RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 SLC19A2O60779 497 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 TNFP01375 233 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 NID1P14543 1247 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 STAT5AP42229 794 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 SLC25A30Q5SVS4 291 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 RPTNQ6XPR3 784 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 ARIH2OSQ8N7S6 290 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 TRMT10AQ8TBZ6 339 aaKnown RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 FGF20Q9NP95 211 aaPredicted RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 MEPEQ9NQ76 525 aaPredicted RBP12.73□□□□□ -0.37
SF1-202ENST00000334944 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
SF1-202ENST00000334944 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 CHST10O43529 356 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 GMFGO60234 142 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 FZD7O75084 574 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 RP2O75695 350 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 PTHLHP12272 177 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 FGF9P31371 208 aaPredicted RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 BPIFA2Q96DR5 249 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 CD180Q99467 661 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 C2CD4DB7Z1M9 353 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 E9PI62 339 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 HLA-DPB1P04440 258 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 ZNF10P21506 573 aaPredicted RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 MST1P26927 711 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 PSMA6P60900 246 aaKnown RBP12.72□□□□□ -0.37
SF1-202ENST00000334944 MGAT2Q10469 447 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 GUCA2BQ16661 112 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 LRRN1Q6UXK5 716 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 CDH26Q8IXH8 852 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 SFT2D1Q8WV19 159 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
SF1-202ENST00000334944 A0A0J9YY10 115 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 FAM25EA8MYX2 175 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 SMAD9O15198 467 aaKnown RBP12.71□□□□□ -0.37
SF1-202ENST00000334944 AKR7A3O95154 331 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 PPP1R3DO95685 299 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 ECDO95905 644 aaPredicted RBP12.71□□□□□ -0.37
SF1-202ENST00000334944 MAOAP21397 527 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 FZD5Q13467 585 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 TMUB2Q71RG4 321 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 MRGPREQ86SM8 312 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 OAFQ86UD1 273 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 SLC44A3Q8N4M1 653 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 RFKQ969G6 155 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 INTS12Q96CB8 462 aaKnown RBP12.71□□□□□ -0.37
SF1-202ENST00000334944 LMF1Q96S06 567 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 ZNF649Q9BS31 505 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 FLRT3Q9NZU0 649 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 SPACA6W5XKT8 324 aa12.71□□□□□ -0.37
SF1-202ENST00000334944 IMPA2O14732 288 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 ATP1B1P05026 303 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 NGFRP08138 427 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 BMP7P18075 431 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 DRD1P21728 446 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 PAICSP22234 425 aaKnown RBP12.71□□□□□ -0.38
SF1-202ENST00000334944 S100A11P31949 105 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 ARFIP1P53367 373 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 FZD2Q14332 565 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 LRRC28Q86X40 367 aaPredicted RBP12.71□□□□□ -0.38
SF1-202ENST00000334944 GJD3Q8N144 294 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 RFLNBQ8N5W9 214 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 OR51Q1Q8NH59 317 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 GINS4Q9BRT9 223 aa12.71□□□□□ -0.38
SF1-202ENST00000334944 DNTTIP1Q9H147 329 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms