RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR1J2Q8NGS2 313 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 PFN4Q8NHR9 129 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 EMC6Q9BV81 110 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 FSCN3Q9NQT6 498 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 PCDHGA3Q9Y5H0 932 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 SOCS6O14544 535 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 HOXC4P09017 264 aaPredicted RBP13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ARRB2P32121 409 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 GPNMBQ14956 572 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
C9orf47-201ENST00000334490 HRASLS5Q96KN8 279 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 NECAB3Q96P71 396 aaPredicted RBP13.8□□□□□ -0.2
C9orf47-201ENST00000334490 MOV10Q9HCE1 1003 aaKnown RBP13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF224Q9NZL3 707 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF281Q9Y2X9 895 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 IFNGR1P15260 489 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 EVI2BP34910 448 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 FXYD4P59646 89 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 MLLT11Q13015 90 aaPredicted RBP13.8□□□□□ -0.2
C9orf47-201ENST00000334490 GNMTQ14749 295 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF181Q2M3W8 571 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 STX12Q86Y82 276 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 PM20D2Q8IYS1 436 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 ST6GALNAC5Q9BVH7 336 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 WDR76Q9H967 626 aa13.8□□□□□ -0.2
C9orf47-201ENST00000334490 A0A1W2PNR3 127 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 TRAPPC2LH3BP13 241 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 CTSVO60911 334 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 YES1P07947 543 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 RFC3P40938 356 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 DUSP8Q13202 625 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 OR8H3Q8N146 312 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 SIMC1Q8NDZ2 872 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 SYT3Q9BQG1 590 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 MRI1Q9BV20 369 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 PPIAP62937 165 aaKnown RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 RNF4P78317 190 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 NDNFQ8TB73 568 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 FOXRED1Q96CU9 486 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF582Q96NG8 517 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 A0A087WUU8 490 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 A0A1B0GVC2 190 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 FOLR1P15328 257 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 PNLIPRP2P54317 469 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 SEC61A1P61619 476 aaKnown RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 IL10RAQ13651 578 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 PCGF3Q3KNV8 242 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF709Q8N972 641 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 OR11A1Q9GZK7 315 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 NTNG1Q9Y2I2 539 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 VAMP5O95183 116 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 TFPTP0C1Z6 253 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 SERPINA2P20848 420 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 HYAL4Q2M3T9 481 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 CMPK2Q5EBM0 449 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF431Q8TF32 576 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-201ENST00000334490 SARAFQ96BY9 339 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 COX14Q96I36 57 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 DNAJC13O75165 2243 aa13.79□□□□□ -0.2
C9orf47-201ENST00000334490 AGAP5A6NIR3 686 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF195O14628 629 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 LCN1P31025 176 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 LSSP48449 732 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 IL11RAQ14626 422 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ESPNLQ6ZVH7 1005 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 MNTQ99583 582 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 LAT2Q9GZY6 243 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 PRDM7Q9NQW5 492 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 OR14J1Q9UGF5 321 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 RASD1Q9Y272 281 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ACOD1A6NK06 481 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 CLDN24A6NM45 220 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ADAM23O75077 832 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 DRD5P21918 477 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 CA5AP35218 305 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 MEP1BQ16820 701 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 MAML2Q8IZL2 1156 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-201ENST00000334490 NLKQ9UBE8 527 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 PAPLNO95428 1278 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 PET100P0DJ07 73 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 CHRNB1P11230 501 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ABI3BPQ7Z7G0 1075 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 OR1L3Q8NH93 324 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 GIMAP5Q96F15 307 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 RAB9BQ9NP90 201 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ENPP5Q9UJA9 477 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 A0A0A6YYD5 115 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms