RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GLS2Q9UI32 602 aa21.6■■□□□ 1.05
TSKU-201ENST00000333090 ZNF346Q9UL40 294 aaKnown RBP21.6■■□□□ 1.05
TSKU-201ENST00000333090 H3BSH0 61 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 SPDEFO95238 335 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 TPMTP51580 245 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 DCAF12L2Q5VW00 463 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 DND1Q8IYX4 353 aaKnown RBP21.59■■□□□ 1.05
TSKU-201ENST00000333090 TRIM2Q9C040 744 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 TMEM138Q9NPI0 162 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 COLEC10Q9Y6Z7 277 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 MUC22E2RYF6 1773 aaPredicted RBP21.59■■□□□ 1.05
TSKU-201ENST00000333090 F5H5P2 479 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 EML2O95834 649 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 ERVK-25P63136 954 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 HTRA4P83105 476 aaPredicted RBP21.59■■□□□ 1.05
TSKU-201ENST00000333090 CST6Q15828 149 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 NAXDQ8IW45 347 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 GLB1L2Q8IW92 636 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 OR4D10Q8NGI6 311 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 OR4C16Q8NGL9 310 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 LRFN5Q96NI6 719 aa21.59■■□□□ 1.05
TSKU-201ENST00000333090 DNAJB12Q9NXW2 375 aaKnown RBP21.59■■□□□ 1.05
TSKU-201ENST00000333090 MRPS2Q9Y399 296 aaKnown RBP21.59■■□□□ 1.05
TSKU-201ENST00000333090 RBBP9O75884 186 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 OR8G3PP0DMU2 310 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 CALCRP30988 508 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 C11orf88Q6PI97 169 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 KIRREL2Q6UWL6 708 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 ZNF511Q8NB15 262 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 OR5T3Q8NGG3 340 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 TNFAIP8L1Q8WVP5 186 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 NSMAFQ92636 917 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 OR2A5Q96R48 311 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 KIR3DX1Q9H7L2 352 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 SLC17A4Q9Y2C5 497 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 A0A087WV62 115 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 A0A1B0GTQ1 180 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 CTNSO60931 367 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 AK1P00568 194 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 APOC3P02656 99 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 FAUP35544 74 aaKnown RBP21.58■■□□□ 1.05
TSKU-201ENST00000333090 MAT1AQ00266 395 aaKnown RBP21.58■■□□□ 1.05
TSKU-201ENST00000333090 SGCGQ13326 291 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 PRICKLE4Q2TBC4 344 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 SLC36A1Q7Z2H8 476 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 SLC43A2Q8N370 569 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 OR2AK2Q8NG84 335 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 Q96M85 177 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 CERS4Q9HA82 394 aa21.58■■□□□ 1.05
TSKU-201ENST00000333090 MKKSQ9NPJ1 570 aaPredicted RBP21.58■■□□□ 1.05
TSKU-201ENST00000333090 PRR19A6NJB7 356 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 SDC3O75056 442 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 GLSO94925 669 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 KDM4BO94953 1096 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 LDOC1O95751 146 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 MAS1P04201 325 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 SMIM10L1P0DMW3 83 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 Q499Y3 187 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 C1orf53Q5VUE5 145 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 ZNF660Q6AZW8 331 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 MAMSTRQ6ZN01 415 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 MUC20Q8N307 709 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 BADQ92934 168 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 ZNF707Q96C28 371 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 SMIM10Q96HG1 83 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 MRI1Q9BV20 369 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 SRMSQ9H3Y6 488 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 EXOSC3Q9NQT5 275 aaKnown RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 TBC1D29Q9UFV1 150 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 CACNA1CQ13936 2221 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 C4orf47A7E2U8 309 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 LTBQ06643 244 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 VITQ6UXI7 678 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 HSD17B13Q7Z5P4 300 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 RNF166Q96A37 237 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 HRH3Q9Y5N1 445 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 IGF2P01344 180 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 YOD1Q5VVQ6 348 aaPredicted RBP21.57■■□□□ 1.04
TSKU-201ENST00000333090 LRFN4Q6PJG9 635 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 ATRAIDQ6UW56 229 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 OR4N2Q8NGD1 307 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 OR5AK2Q8NH90 309 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 RPS4Y2Q8TD47 263 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 C15orf40Q8WUR7 153 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 TSSK2Q96PF2 358 aa21.57■■□□□ 1.04
TSKU-201ENST00000333090 MEIS3P1A6NDR6 274 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 ANXA2P07355 339 aaKnown RBP21.56■■□□□ 1.04
TSKU-201ENST00000333090 GMFBP60983 142 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 ULK3Q6PHR2 472 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 CDH26Q8IXH8 852 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 OR5M9Q8NGP3 310 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 OR8K3Q8NH51 312 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 RXFP3Q9NSD7 469 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 DPP7Q9UHL4 492 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 ETV7Q9Y603 341 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 TMEM72A0PK05 275 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 URADA6NGE7 173 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 TRIOO75962 3097 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 MAP3K8P41279 467 aa21.56■■□□□ 1.04
TSKU-201ENST00000333090 FAM53BQ14153 422 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms