RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 AQP5P55064 265 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 RAG2P55895 527 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 HGFACQ04756 655 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 HLXQ14774 488 aaPredicted RBP12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 CD226Q15762 336 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 RUSC1-AS1Q66K80 236 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 ANKRD16Q6P6B7 361 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF614Q8N883 585 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 XAGE5Q8WWM1 108 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 OIT3Q8WWZ8 545 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 TEX37Q96LM6 180 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 SIKE1Q9BRV8 207 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 OR51I1Q9H343 314 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 OBP2BQ9NPH6 170 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 POLE3Q9NRF9 147 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 TRIM33Q9UPN9 1127 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 PLXNB1O43157 2135 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 GPR171O14626 319 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 NUDT14O95848 222 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 CECR9P0C854 216 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 SELEP16581 610 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 ARHGAP11BQ3KRB8 267 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 ARMCX4Q5H9R4 360 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 MAVSQ7Z434 540 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 OR5D16Q8NGK9 328 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 POP5Q969H6 163 aaKnown RBP12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 WWC2-AS2Q96NR7 200 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 SDF2Q99470 211 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF416Q9BWM5 594 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 SLC7A10Q9NS82 523 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 DTNAQ9Y4J8 743 aa12.64□□□□□ -0.39
CTHRC1-201ENST00000330295 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 H6PDO95479 791 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 NGFP01138 241 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 GUSBP08236 651 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 OR12D1P0DN82 309 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 PRKCAP17252 672 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 IL12AP29459 219 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 DIO1P49895 249 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 SUMO3P55854 103 aaPredicted RBP12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF117Q03924 483 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 GNA13Q14344 377 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 GPR68Q15743 365 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 GPAT3Q53EU6 434 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 KLHL26Q53HC5 615 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 TNFAIP8L2Q6P589 184 aaPredicted RBP12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 CASP12Q6UXS9 341 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 ZAR1Q86SH2 424 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 CLEC4FQ8N1N0 589 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 STON2Q8WXE9 905 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 RAD21L1Q9H4I0 556 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 THUMPD1Q9NXG2 353 aaKnown RBP12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 WDR45Q9Y484 360 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 KCNE3Q9Y6H6 103 aa12.63□□□□□ -0.39
CTHRC1-201ENST00000330295 NUP214P35658 2090 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 M0R233 179 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 SYNGR3O43761 229 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 RP2O75695 350 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 GSNP06396 782 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 ZCCHC18P0CG32 403 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TCN1P20061 433 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 MPGP29372 298 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 MRPL19P49406 292 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 MRPS11P82912 194 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TOMM34Q15785 309 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 C3orf36Q3SXR2 165 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TIGD2Q4W5G0 525 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 EIF3MQ7L2H7 374 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 PMM1Q92871 262 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 TRNT1Q96Q11 434 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 MS4A5Q9H3V2 200 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 SEC61A2Q9H9S3 476 aa12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 CRNNQ9UBG3 495 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-201ENST00000330295 SULT2B1O00204 365 aa12.61□□□□□ -0.39
CTHRC1-201ENST00000330295 ZNF264O43296 627 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms