RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ZNF281Q9Y2X9 895 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
TPM3-206ENST00000330188 ANKRD61A6NGH8 418 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 ZNF879B4DU55 563 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 H7C1C5 153 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 GMFGO60234 142 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 UBL3O95164 117 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 YES1P07947 543 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 SRMP19623 302 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 TCEA1P23193 301 aaKnown RBP13.23□□□□□ -0.29
TPM3-206ENST00000330188 CSF2RBP32927 897 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 SRP9P49458 86 aaKnown RBP13.23□□□□□ -0.29
TPM3-206ENST00000330188 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
TPM3-206ENST00000330188 LCN6P62502 163 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 TOMM34Q15785 309 aaPredicted RBP13.23□□□□□ -0.29
TPM3-206ENST00000330188 SLC36A2Q495M3 483 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 EMC4Q5J8M3 183 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 SLC6A19Q695T7 634 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 PLXDC1Q8IUK5 500 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 YIPF7Q8N8F6 280 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 YIPF5Q969M3 257 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 ORAI1Q96D31 301 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 GFI1Q99684 422 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 FKRPQ9H9S5 495 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 SRA1Q9HD15 236 aaKnown RBP13.23□□□□□ -0.29
TPM3-206ENST00000330188 ANKRD10Q9NXR5 420 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 ADAMTS20P59510 1910 aa13.23□□□□□ -0.29
TPM3-206ENST00000330188 FER1L5A0AVI2 2057 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 A0A1W2PQD3 144 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 TMEM72A0PK05 275 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 ACOD1A6NK06 481 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 TO15178 435 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 HCRTR2O43614 444 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 NUDT21O43809 227 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 DUX1O43812 170 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 ZFPL1O95159 310 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 BGLAPP02818 100 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 OR8G3PP0DMU2 310 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 RRAS2P62070 204 aaPredicted RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 BTG1P62324 171 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 NSDHLQ15738 373 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 NDUFA5Q16718 116 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 ESPNLQ6ZVH7 1005 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 LGALS14Q8TCE9 139 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 DERL3Q96Q80 235 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 GALNT9Q9HCQ5 603 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 PLSCR3Q9NRY6 295 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 PAQR5Q9NXK6 330 aaPredicted RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 SEMA5BQ9P283 1151 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 MRM2Q9UI43 246 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 MRPS17Q9Y2R5 130 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 PCDHGA9Q9Y5G4 932 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 A0A087WV48 116 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 UPK3AO75631 287 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 MAGEB1P43366 347 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 MMP15P51511 669 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 RAB25P57735 213 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 DGCR2P98153 550 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 PLCXD2Q0VAA5 305 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 HLA-DQA1Q5Y7H0 255 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 KRT74Q7RTS7 529 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 HSD17B8Q92506 261 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 DAZLQ92904 295 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 SLC41A2Q96JW4 573 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 ADAD1Q96M93 576 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 GFM1Q96RP9 751 aaKnown RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 ELF4Q99607 663 aaPredicted RBP13.22□□□□□ -0.29
TPM3-206ENST00000330188 WWTR1Q9GZV5 400 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 SLC25A18Q9H1K4 315 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
TPM3-206ENST00000330188 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 NDUFB5O43674 189 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 RPP14O95059 124 aaKnown RBP13.21□□□□□ -0.29
TPM3-206ENST00000330188 ABHD16AO95870 558 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 HIST1H2ABP04908 130 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 CD3GP09693 182 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 MYF5P13349 255 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 BCKDHBP21953 392 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 CXCR1P25024 350 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 PITPNAQ00169 270 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 NTRK2Q16620 822 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 ARHGAP40Q5TG30 622 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 HIST3H2AQ7L7L0 130 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 KCTD20Q7Z5Y7 419 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 OR6V1Q8N148 313 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 ASCC1Q8N9N2 400 aaKnown RBP13.21□□□□□ -0.29
TPM3-206ENST00000330188 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 ZNF671Q8TAW3 534 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 HIST1H2ACQ93077 130 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms