RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TIPRLO75663 272 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 RFPL3SP0C7P2 107 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 PRG2P13727 222 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 MST1P26927 711 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 MPGP29372 298 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CRYBA2P53672 197 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ACTC1P68032 377 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ACTA1P68133 377 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 MRPL49Q13405 166 aaKnown RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 TRIP10Q15642 601 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CTU2Q2VPK5 515 aaKnown RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 IQCCQ4KMZ1 466 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OGFRL1Q5TC84 451 aaPredicted RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 C1QL3Q5VWW1 255 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 KDM4DQ6B0I6 523 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ARL9Q6T311 187 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLC35D2Q76EJ3 337 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLC46A3Q7Z3Q1 461 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ARIH2OSQ8N7S6 290 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 NOXO1Q8NFA2 376 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OR10H5Q8NGA6 315 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF417Q8TAU3 575 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLC7A13Q8TCU3 470 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF566Q969W8 418 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ZNF587Q96SQ5 575 aaPredicted RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 PTDSS2Q9BVG9 487 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 KCNJ16Q9NPI9 418 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 PLSCR4Q9NRQ2 329 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CLN6Q9NWW5 311 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 GALNT8Q9NY28 637 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 WARS2Q9UGM6 360 aaKnown RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 IGKV1D-42A0A075B6H8 117 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ACOD1A6NK06 481 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLC22A31A6NKX4 558 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 C12orf71A8MTZ7 269 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 HRGP04196 525 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 COX5BP10606 129 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ACADSP16219 412 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 ARR3P36575 388 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 NUDT6P53370 316 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CTXN1P60606 82 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 KRR1Q13601 381 aaKnown RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 GLIPR1L2Q4G1C9 344 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 C10orf128Q5T292 105 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLX4IPQ5VYV7 408 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 PRICKLE2Q7Z3G6 844 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OR8J1Q8NGP2 316 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OR6N1Q8NGY5 312 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 RNASE6Q93091 150 aaKnown RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SLC25A36Q96CQ1 311 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 PITX2Q99697 317 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 TSPAN10Q9H1Z9 355 aaPredicted RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OR52D1Q9H346 318 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 OPA3Q9H6K4 179 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 NEK6Q9HC98 313 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 VSX1Q9NZR4 365 aaPredicted RBP4.62□□□□□ -1.67
LRIT3-201ENST00000327908 NDRG3Q9UGV2 375 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 SIGLEC7Q9Y286 467 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 V9GYQ6 96 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CCDC88CQ9P219 2028 aa4.62□□□□□ -1.67
LRIT3-201ENST00000327908 CNOT1A5YKK6 2376 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 CENPVL1A0A0U1RR11 272 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 KDM4EB2RXH2 506 aaPredicted RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 H3BN98 237 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 CCL21O00585 134 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 SLC16A6O15403 523 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 PTP4A3O75365 173 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 UBL3O95164 117 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 IMPDH2P12268 514 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 RPS5P46782 204 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 RPS23P62266 143 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 SCRN3Q0VDG4 424 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 SLC17A1Q14916 467 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 PON3Q15166 354 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 MOGQ16653 247 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 NDUFAF6Q330K2 333 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 CREB3L2Q70SY1 520 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 FAM86B1Q8N7N1 296 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 FAM222BQ8WU58 562 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TMEM255BQ8WV15 326 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 ASB10Q8WXI3 467 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 ASB17Q8WXJ9 295 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TMEM54Q969K7 222 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TAAR8Q969N4 342 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 RADILQ96JH8 1075 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TTYH2Q9BSA4 534 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TSSK6Q9BXA6 273 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 SPEF1Q9Y4P9 236 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 URB1O60287 2271 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 CACNA1AO00555 2505 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 EML6Q6ZMW3 1958 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 TRBV4-1A0A0J9YWV2 114 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 SMAD9O15198 467 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 ATP6V1G2O95670 118 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 F10P00742 488 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 GLI4P10075 376 aa4.61□□□□□ -1.67
LRIT3-201ENST00000327908 PSMB1P20618 241 aaKnown RBP4.61□□□□□ -1.67
LRIT3-201ENST00000327908 IL32P24001 234 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms