RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 AWAT2Q6E213 333 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 IDO2Q6ZQW0 420 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CMIPQ8IY22 773 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ASB12Q8WXK4 309 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 UPRTQ96BW1 309 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 GMEB2Q9UKD1 530 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 SCN4AP35499 1836 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 POM121BA6NF01 834 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 IFITM5A6NNB3 132 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 AIPO00170 330 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF593O00488 134 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 PLA2G10O15496 165 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 P2RX6O15547 441 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CEACAM5P06731 702 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF35P13682 527 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 SLC25A30Q5SVS4 291 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CLVS2Q5SYC1 327 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 HEPHL1Q6MZM0 1159 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 RFPL4BQ6ZWI9 263 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 SLC16A9Q7RTY1 509 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 LRFN5Q96NI6 719 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 GPR171O14626 319 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CTNSO60931 367 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 HLA-AP01891 365 aaKnown RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 MAOBP27338 520 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 GALK2Q01415 458 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 TLE3Q04726 772 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 VASNQ6EMK4 673 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 STEAP1BQ6NZ63 245 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF454Q8N9F8 522 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 MORN4Q8NDC4 146 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 KCNIP3Q9Y2W7 256 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CCDC88CQ9P219 2028 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 A6NIZ1 184 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 M0R036 132 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 CALCBP10092 127 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 SPI1P17947 270 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 SLC2A5P22732 501 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 MMP15P51511 669 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 RAP1BP61224 184 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 RAP1AP62834 184 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 RUNX2Q13950 521 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 PM20D2Q8IYS1 436 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 STEAP2Q8NFT2 490 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 FAM3CQ92520 227 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 PCDHB16Q9NRJ7 776 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-201ENST00000323668 ASF1BQ9NVP2 202 aa13.56□□□□□ -0.24
TCOF1-201ENST00000323668 A0A087WV62 115 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 TRAV1-2A0A0B4J238 106 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 HEXBP07686 556 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 IFNGR1P15260 489 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 DRD1P21728 446 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SGCAQ16586 387 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 GLYR1Q49A26 553 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SMIM4Q8WVI0 70 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SAV1Q9H4B6 383 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-201ENST00000323668 HRASLSQ9HDD0 168 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 OBP2AQ9NY56 170 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 STEAP1Q9UHE8 339 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 EXOGQ9Y2C4 368 aaKnown RBP13.55□□□□□ -0.24
TCOF1-201ENST00000323668 TMEM269A0A1B0GVZ9 245 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SIX6O95475 246 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 TNFRSF4P43489 277 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 NDUFAF7Q7L592 441 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SLC6A17Q9H1V8 727 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 PPP4R1LQ9P1A2 415 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 FLVCR2Q9UPI3 526 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 A0A0D9SG52 128 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 MPIG6BO95866 241 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 NUDT1P36639 197 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 EXOSC2Q13868 293 aaKnown RBP13.55□□□□□ -0.24
TCOF1-201ENST00000323668 C1orf189Q5VU69 101 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 MED25Q71SY5 747 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-201ENST00000323668 F8W036 122 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 CISD3P0C7P0 127 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 BLOC1S1P78537 153 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 TEX261Q6UWH6 196 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 ARL11Q969Q4 196 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 APMAPQ9HDC9 416 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 SLC23A1Q9UHI7 598 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 U3KQ87 197 aa13.55□□□□□ -0.24
TCOF1-201ENST00000323668 CDC14CA4D256 554 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 PLPP2O43688 288 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 ADH6P28332 368 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 POU3F4P49335 361 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 PER3P56645 1201 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
TCOF1-201ENST00000323668 MEP1BQ16820 701 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 TMPRSS11FQ6ZWK6 438 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 FAM3DQ96BQ1 224 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 PGAM5Q96HS1 289 aa13.54□□□□□ -0.24
TCOF1-201ENST00000323668 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms