RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FAM69AQ5T7M9 428 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 AGBL2Q5U5Z8 902 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CARD17Q5XLA6 110 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 ANKRD16Q6P6B7 361 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 MDP1Q86V88 176 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 ARIH2OSQ8N7S6 290 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 LRRC8CQ8TDW0 803 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 SLC38A4Q969I6 547 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 SLC35B4Q969S0 331 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 THOC1Q96FV9 657 aaKnown RBP10.72□□□□□ -0.69
TPM3-204ENST00000323144 MOGAT1Q96PD6 335 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 KCNS3Q9BQ31 491 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 ARMC7Q9H6L4 198 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 GPR35Q9HC97 309 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.72□□□□□ -0.69
TPM3-204ENST00000323144 ZNF232Q9UNY5 417 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 FKBP7Q9Y680 259 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 RTTNQ86VV8 2226 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 TRAV36DV7A0A075B6V5 113 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 A0A0B4J2E0 115 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 A0A1B0GX12 115 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 SLC35F4A4IF30 521 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 RNF212BA8MTL3 300 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 TPST2O60704 377 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 SLC43A1O75387 559 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 ERLIN1O75477 346 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 IGKV3-15P01624 115 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 BGLAPP02818 100 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 OR4A8P0C604 315 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 ZNF43P17038 809 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 USF1P22415 310 aaPredicted RBP10.71□□□□□ -0.69
TPM3-204ENST00000323144 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
TPM3-204ENST00000323144 HGFACQ04756 655 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 NPTX1Q15818 432 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 ADRM1Q16186 407 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 MSMPQ1L6U9 139 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 AGKQ53H12 422 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 REEP3Q6NUK4 255 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 CDK20Q8IZL9 346 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 GPR137CQ8N3F9 429 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 SVOPLQ8N434 492 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 LSMEM1Q8N8F7 131 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 RNF217Q8TC41 542 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 MAGEE2Q8TD90 523 aaPredicted RBP10.71□□□□□ -0.69
TPM3-204ENST00000323144 OXGR1Q96P68 337 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 SOX7Q9BT81 388 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 EMC6Q9BV81 110 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 C12orf10Q9HB07 376 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 CRLF2Q9HC73 371 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 MED29Q9NX70 200 aa10.71□□□□□ -0.69
TPM3-204ENST00000323144 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.78e-7■■■■□ 20.9
TPM3-204ENST00000323144 OR6C65A6NJZ3 312 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 RPL36A-HNRNPH2H7BZ11 118 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 hCG_2039718K7EN88 272 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 M0R3G1 203 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 SERPINI2O75830 405 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PDE5AO76074 875 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 CRYAAP02489 173 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 IGFBP1P08833 259 aaPredicted RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 SERPINF1P36955 418 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 NR4A2P43354 598 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 CAPZA2P47755 286 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PDLIM4P50479 330 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 MTPNP58546 118 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 SNTB2Q13425 540 aaKnown RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 C1DQ13901 141 aaKnown RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 SQLEQ14534 574 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 EFNB3Q15768 340 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 WDR88Q6ZMY6 472 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 DHDDSQ86SQ9 333 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 RETREG3Q86VR2 466 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 TSPYL5Q86VY4 417 aaPredicted RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 KRT73Q86Y46 540 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PTOV1Q86YD1 416 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 SMYD1Q8NB12 490 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 ADPRHL1Q8NDY3 354 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 GPR32P1Q8NGA4 272 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 VRK1Q99986 396 aaPredicted RBP10.7□□□□□ -0.7
TPM3-204ENST00000323144 CCDC28BQ9BUN5 200 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 BPESC1Q9GZL8 116 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PLK3Q9H4B4 646 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 ZNF385DQ9H6B1 395 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 TMEM38AQ9H6F2 299 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 PMF1-BGLAPU3KQ54 211 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
TPM3-204ENST00000323144 A0A087WUJ7 227 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 AKAP8O43823 692 aaKnown RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 F12P00748 615 aaPredicted RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 HLA-HP01893 362 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 B4GALT1P15291 398 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 PPIBP23284 216 aaKnown RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 THBS4P35443 961 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 PPOXP50336 477 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms