RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GPR139Q6DWJ6 353 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 UBE3DQ7Z6J8 389 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 LSMEM1Q8N8F7 131 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 ZBTB8AQ96BR9 441 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 RNF170Q96K19 258 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 ELF5Q9UKW6 265 aaPredicted RBP11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 NPIPA1Q9UND3 350 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 ERVK-19Q9WJR5 959 aa11.73□□□□□ -0.53
DNMT3A-202ENST00000321117 EP400Q96L91 3159 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ZNF705EA8MWA4 302 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 H7C1C5 153 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 PGAM2P15259 253 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 LCN6P62502 163 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 STEAP1BQ6NZ63 245 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 GRAMD2AQ8IUY3 354 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 PELI1Q96FA3 418 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 PHB2Q99623 299 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 LMF2Q9BU23 707 aaKnown RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 HLA-AP01891 365 aaKnown RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 UBE2MP61081 183 aaKnown RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 TMPRSS11FQ6ZWK6 438 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 BPIFB2Q8N4F0 458 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 OR6M1Q8NGM8 313 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 DVL3Q92997 716 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 FBXL4Q9UKA2 621 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 MOKQ9UQ07 419 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ENTPD2Q9Y5L3 495 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ARID1AO14497 2285 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 TMEM212A6NML5 194 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 SPI1P17947 270 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 CCINQ13939 588 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 GPR18Q14330 331 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 RTL10Q7L3V2 364 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 PELOQ9BRX2 385 aaKnown RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ELOVL3Q9HB03 270 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 TRPM6Q9BX84 2022 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 A0A1W2PS29 197 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 SOX9P48436 509 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 LSSP48449 732 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 BLKP51451 505 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 LGALSLQ3ZCW2 172 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 FAM78AQ5JUQ0 283 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 MAMDC2Q7Z304 686 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 DGLUCYQ7Z3D6 616 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 OR9A4Q8NGU2 314 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ARL11Q969Q4 196 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 SENP5Q96HI0 755 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 GPR137Q96N19 417 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 UBL7Q96S82 380 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 TSPAN10Q9H1Z9 355 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 GHITMQ9H3K2 345 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
DNMT3A-202ENST00000321117 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 PRAMEF27A3QJZ7 478 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 CD14P08571 375 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 H2BFMP0C1H6 154 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 SULT1A3P0DMM9 295 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 SULT1A4P0DMN0 295 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 ZNF542PQ5EBM4 170 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 CLVS2Q5SYC1 327 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 USP53Q70EK8 1073 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 FGF13Q92913 245 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 SEC22AQ96IW7 307 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 ZC3H10Q96K80 434 aaKnown RBP11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 KCNJ15Q99712 375 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 C6orf106Q9H6K1 298 aaPredicted RBP11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 SEC61A2Q9H9S3 476 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 ADGRL4Q9HBW9 690 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 MKL2Q9ULH7 1088 aa11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.53
DNMT3A-202ENST00000321117 FGF17O60258 216 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 RRASP10301 218 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 UBL4AP11441 157 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 NTSR1P30989 418 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 POU3F4P49335 361 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 C1orf61Q13536 156 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 WBP2NLQ6ICG8 309 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 FAM180AQ6UWF9 173 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 CD163Q86VB7 1156 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 FOXN4Q96NZ1 517 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 LGALS8O00214 317 aa11.71□□□□□ -0.54
DNMT3A-202ENST00000321117 SHOXO15266 292 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms