RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C20orf141Q9NUB4 165 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 HHLA2Q9UM44 414 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SERPINA2P20848 420 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 IL17RDQ8NFM7 739 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 OR51T1Q8NGJ9 327 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 LILRB4Q8NHJ6 448 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SLC7A6Q92536 515 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SLC25A46Q96AG3 418 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SELENOIQ9C0D9 397 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF160Q9HCG1 818 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ABI3Q9P2A4 366 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 MRPS2Q9Y399 296 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 LSM5Q9Y4Y9 91 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ABCA1O95477 2261 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 KCNE1BA0A087WTH5 132 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SUSD5O60279 629 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CTSVO60911 334 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 HBQ1P09105 142 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 EID2Q8N6I1 236 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CLDN22Q8N7P3 220 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 OR5L2Q8NGL0 311 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 RSPRY1Q96DX4 576 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 DCLRE1CQ96SD1 692 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 PTPRFP10586 1907 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 P2RY10O00398 339 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SYT5O00445 386 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 HSPB6O14558 160 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CNOT4O95628 575 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 DBHP09172 617 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CFL1P23528 166 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 SNRPGP62308 76 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 KANSL1Q7Z3B3 1105 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 PLA2G2FQ9BZM2 168 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 PITHD1Q9GZP4 211 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ASF1BQ9NVP2 202 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 COPZ2Q9P299 210 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 PCDHGB2Q9Y5G2 931 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 NPC1O15118 1278 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ANXA7P20073 488 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CD1CP29017 333 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 CASRP41180 1078 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 HNRNPFP52597 415 aaKnown RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 RRAS2P62070 204 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-201ENST00000320081 IL13RA1P78552 427 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 GLYATL3Q5SZD4 288 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 TSSK4Q6SA08 328 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 FAM198BQ6UWH4 519 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 C16orf52Q8NHV5 167 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF576Q9H609 170 aa15.17■□□□□ 0.02
CLIP4-201ENST00000320081 COL24A1Q17RW2 1714 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 OR2T1O43869 369 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 SC5DO75845 299 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 UGT2B10P36537 528 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 ACTBP60709 375 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 ACTG1P63261 375 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 PAPD4Q6PIY7 484 aaKnown RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 MEX3BQ6ZN04 569 aaKnown RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 BPIFB2Q8N4F0 458 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 SFXN2Q96NB2 322 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 OR6C1Q96RD1 312 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 AKIP1Q9NQ31 210 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 A4GNTQ9UNA3 340 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 CCL27Q9Y4X3 112 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 IGLV3-16A0A075B6K0 115 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 TRABD2BA6NFA1 517 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 LAMTOR5O43504 91 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 KCNK2O95069 426 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 HLA-AP01891 365 aaKnown RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 C16orf47Q6ZP98 133 aaPredicted RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 OR4C3Q8NH37 302 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 HOXD1Q9GZZ0 328 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 KCNN3Q9UGI6 736 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 CD14P08571 375 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 SLC35E2P0CK97 266 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 PSMB1P20618 241 aaKnown RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 CXCL12P48061 93 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 KIAA1024LP59773 190 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 DLX2Q07687 328 aaPredicted RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 GPR176Q14439 515 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 METTL11BQ5VVY1 283 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 FAM57BQ71RH2 274 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 SGCZQ96LD1 299 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 DDOQ99489 341 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 CDCA4Q9BXL8 241 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 NUBP2Q9Y5Y2 271 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
CLIP4-201ENST00000320081 WDR87Q6ZQQ6 2873 aa15.16■□□□□ 0.02
CLIP4-201ENST00000320081 CIB4A0PJX0 185 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 ANKRD34BA5PLL1 514 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 OR2T7P0C7T2 308 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 EDN3P14138 238 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 MSX1P28360 303 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF84P51523 738 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 EFR3AQ14156 821 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 RPL22L1Q6P5R6 122 aaKnown RBP15.15■□□□□ 0.02
CLIP4-201ENST00000320081 GPR137CQ8N3F9 429 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 OR2T27Q8NH04 317 aa15.15■□□□□ 0.02
CLIP4-201ENST00000320081 HOXB13Q92826 284 aaPredicted RBP15.15■□□□□ 0.02
CLIP4-201ENST00000320081 LMF2Q9BU23 707 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms