RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PPIL1Q9Y3C6 166 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 MRPS18CQ9Y3D5 142 aaKnown RBP3.38□□□□□ -1.87
SMCO3-201ENST00000316048 ANAPC1Q9H1A4 1944 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
SMCO3-201ENST00000316048 LOC100653049A0A140TA62 436 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MEIOCA2RUB1 952 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SUPT3HB4E1H0 165 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 E9PBE3 544 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 DCXO43602 365 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR1I1O60431 355 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SUPT3HO75486 399 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF821O75541 412 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 KRT34O76011 436 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TM7SF2O76062 418 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ALPIP09923 528 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CFC1P0CG37 223 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RRASP10301 218 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 COX4I1P13073 169 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TSPAN8P19075 237 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 PDHA2P29803 388 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NSG1P42857 185 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ALDH3B1P43353 468 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CCNHP51946 323 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 IRX1P78414 480 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 STX5Q13190 355 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RIGQ13278 110 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NFATC2Q13469 925 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CYLC2Q14093 348 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MAPRE2Q15555 327 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF77Q15935 545 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TTLL9Q3SXZ7 439 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 UNC50Q53HI1 259 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RIPPLY2Q5TAB7 128 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 C22orf39Q6P5X5 142 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 FAM151BQ6UXP7 276 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 EFL1Q7Z2Z2 1120 aaKnown RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NET1Q7Z628 596 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SERPINA9Q86WD7 417 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 PIANPQ8IYJ0 282 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR2T34Q8NGX1 318 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 STMN2Q93045 179 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ECHDC3Q96DC8 303 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RAB3CQ96E17 227 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MOCOSQ96EN8 888 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SMIM14Q96QK8 99 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR52B2Q96RD2 323 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ATOH8Q96SQ7 321 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 LITAFQ99732 161 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 THTPAQ9BU02 230 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SHCBP1LQ9BZQ2 653 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 LINC00597Q9H2U6 94 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 WDR55Q9H6Y2 383 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 EFCAB1Q9HAE3 211 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 IL26Q9NPH9 171 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 DUS2Q9NX74 493 aaKnown RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TEX10Q9NXF1 929 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 BCAP29Q9UHQ4 241 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ERVW-1Q9UQF0 538 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 DHRS7Q9Y394 339 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 KIAA1671Q9BY89 1806 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ANKRD30BLA7E2S9 258 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 A8MX80 341 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 WASH3PC4AMC7 463 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 K7EQD1 137 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 UBXN8O00124 270 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 UBDO15205 165 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NIPSNAP2O75323 286 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ECI2O75521 394 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NXPH4O95158 308 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 SLC25A14O95258 325 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 PRAMEF12O95522 483 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 PCCBP05166 539 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 UGT2B4P06133 528 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF30P17039 623 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 DLSTP36957 453 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 TSFMP43897 325 aaKnown RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 STK19P49842 368 aaPredicted RBP3.37□□□□□ -1.87
SMCO3-201ENST00000316048 RAP1GDS1P52306 607 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NTHL1P78549 312 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 LRRC74AQ0VAA2 488 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR4D1Q15615 310 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 MYLKQ15746 1914 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CHRNA6Q15825 494 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CCDC6Q16204 474 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CDKN3Q16667 212 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 ZSWIM7Q19AV6 140 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 KRTAP24-1Q3LI83 254 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CTSL3PQ5NE16 218 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 USP43Q70EL4 1123 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 FRA10AC1Q70Z53 315 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 AQP11Q8NBQ7 271 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR56A4Q8NGH8 313 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 OR4F5Q8NH21 305 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CD200R1Q8TD46 325 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 DTX3LQ8TDB6 740 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 CHPT1Q8WUD6 406 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 EEF1AKMT1Q8WVE0 214 aa3.37□□□□□ -1.87
SMCO3-201ENST00000316048 NCLNQ969V3 563 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms