RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ADPRHP54922 357 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 SLC35D3Q5M8T2 416 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TRAPPC6BQ86SZ2 158 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 PPP1R3BQ86XI6 285 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 C1orf198Q9H425 327 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SCN1AP35498 2009 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 DLEC1Q9Y238 1755 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 POM121CA8CG34 1229 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 AGPAT2O15120 278 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SELENOFO60613 162 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 CHRM4P08173 479 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 UBBP0CG47 229 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 UBCP0CG48 685 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 OPCMLQ14982 345 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 CNN3Q15417 329 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 NR0B2Q15466 257 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 ARHGAP11BQ3KRB8 267 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 GDPD3Q7L5L3 318 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 VASH1Q7L8A9 365 aaPredicted RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 CALHM3Q86XJ0 350 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 FRMD1Q8N878 549 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 OR1J4Q8NGS1 313 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SULT4A1Q9BR01 284 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 VN1R3Q9BXE9 311 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 BCL2L10Q9HD36 194 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 NTNG1Q9Y2I2 539 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TNFRSF10CO14798 259 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 FCMRO60667 390 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 GLCEO94923 617 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 CXCL12P48061 93 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 ASAH1Q13510 395 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 GALEQ14376 348 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 MEP1BQ16820 701 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 AKR1C8PQ5T2L2 129 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 FAM57BQ71RH2 274 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 GLYATL2Q8WU03 294 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 NELFAQ9H3P2 528 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 ETV7Q9Y603 341 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.37
SPAST-201ENST00000315285 PAPLNO95428 1278 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 SRMP19623 302 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 BDKRB2P30411 391 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 EEF1A2Q05639 463 aaKnown RBP12.71□□□□□ -0.37
SPAST-201ENST00000315285 SLC14A1Q13336 389 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 BEX5Q5H9J7 111 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 OPN5Q6U736 354 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 OR7G2Q8NG99 324 aa12.71□□□□□ -0.37
SPAST-201ENST00000315285 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 MYOGP15173 224 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 S100PP25815 95 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 CTHP32929 405 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 CLDN6P56747 220 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 ALKAL2Q6UX46 152 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 MEX3BQ6ZN04 569 aaKnown RBP12.71□□□□□ -0.38
SPAST-201ENST00000315285 USP51Q70EK9 711 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 TMEM99Q8N816 258 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.38
SPAST-201ENST00000315285 ELF4Q99607 663 aaPredicted RBP12.71□□□□□ -0.38
SPAST-201ENST00000315285 NICN1Q9BSH3 213 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 ACKR4Q9NPB9 350 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 WASH6PQ9NQA3 447 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 TMPRSS11EQ9UL52 423 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 COPS3Q9UNS2 423 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 MMACHCQ9Y4U1 282 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 SMCO3A2RU48 225 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 CXCL10P02778 98 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 TRAPPC2P0DI81 140 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 TRAPPC2BP0DI82 140 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.38
SPAST-201ENST00000315285 TMEM176BQ3YBM2 270 aaPredicted RBP12.71□□□□□ -0.38
SPAST-201ENST00000315285 OPALINQ96PE5 141 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 EHFQ9NZC4 300 aa12.71□□□□□ -0.38
SPAST-201ENST00000315285 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 WDPCPO95876 746 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CTSLP07711 333 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CSNK1EP49674 416 aaKnown RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 RAB11FIP2Q7L804 512 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 GPR155Q7Z3F1 870 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 KLHL13Q9P2N7 655 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 ZC3H12DA2A288 527 aaKnown RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SMLR1H3BR10 107 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CD79AP11912 226 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms