RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 FAM157BP0CG42 384 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 ZNF43P17038 809 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 USF1P22415 310 aaPredicted RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 SERPINF1P36955 418 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 SELENOPP49908 381 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 UBE2NP61088 152 aaKnown RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 MAGOHP61326 146 aaKnown RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 VLDLRP98155 873 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 MST1LQ2TV78 715 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 TBRG1Q3YBR2 411 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 C6orf10Q5SRN2 563 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 C6orf52Q5T4I8 152 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 PRAMEF8Q5VWM4 474 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 PRAMEF7Q5VXH5 474 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 NIPAL3Q6P499 406 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 ANKRD16Q6P6B7 361 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 LIAT1Q6ZQX7 453 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 SERPINA11Q86U17 422 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 EPHX4Q8IUS5 362 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 MIER2Q8N344 545 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 BVESQ8NE79 360 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 OR1K1Q8NGR3 316 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 RNF217Q8TC41 542 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 MAGEE2Q8TD90 523 aaPredicted RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 GTF2H4Q92759 462 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 BCL2L2Q92843 193 aaPredicted RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 SLC35B4Q969S0 331 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 VPS33AQ96AX1 596 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 C3orf49Q96BT1 292 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 SLC25A36Q96CQ1 311 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 FBXO17Q96EF6 278 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 SLC38A2Q96QD8 506 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 OR52B2Q96RD2 323 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 BEX2Q9BXY8 128 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 LINC00470Q9BZP3 86 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 RAD21L1Q9H4I0 556 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 MOV10Q9HCE1 1003 aaKnown RBP7.1□□□□□ -1.27
TPM3-203ENST00000312970 BCL2L10Q9HD36 194 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 RPS6KB2Q9UBS0 482 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 CHST2Q9Y4C5 530 aa7.1□□□□□ -1.27
TPM3-203ENST00000312970 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 YLPM1P49750 1951 aaKnown RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 ARPC4-TTLL3A0A0A6YYG9 625 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 IGHV1-18A0A0C4DH31 117 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 C5orf58C9J3I9 102 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 FTCDNL1E5RQL4 147 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 RPL36A-HNRNPH2H7BZ11 118 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 NDUFS8O00217 210 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 NR5A2O00482 541 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 TBX1O43435 398 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 FRS3O43559 492 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 OR2T1O43869 369 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 UPK3AO75631 287 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 FAM157CP0CG43 387 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 PNMTP11086 282 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 ETS2P15036 469 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 GTF2E2P29084 291 aaKnown RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 RPS5P46782 204 aaKnown RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 SH3BGRP55822 239 aaPredicted RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 CLDN17P56750 224 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 HOXC5Q00444 222 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 EGR4Q05215 589 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 LGALS3BPQ08380 585 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 FADDQ13158 208 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 GALEQ14376 348 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 GTDC1Q4AE62 458 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 EPGNQ6UW88 154 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 C5orf46Q6UWT4 87 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 MAVSQ7Z434 540 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 NET1Q7Z628 596 aaPredicted RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 KDM8Q8N371 416 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 LSMEM1Q8N8F7 131 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 OR9I1Q8NGQ6 314 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 BBS10Q8TAM1 723 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 TMEM158Q8WZ71 300 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 KTI12Q96EK9 354 aaPredicted RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 OXGR1Q96P68 337 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 ZNF317Q96PQ6 595 aaPredicted RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 KATNB1Q9BVA0 655 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 PAIP1Q9H074 479 aaKnown RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 C12orf10Q9HB07 376 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 A4GALTQ9NPC4 353 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 CA10Q9NS85 328 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 TMEM160Q9NX00 188 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 CRNNQ9UBG3 495 aaPredicted RBP7.09□□□□□ -1.27
TPM3-203ENST00000312970 FKBP7Q9Y680 259 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 USH1CQ9Y6N9 552 aa7.09□□□□□ -1.27
TPM3-203ENST00000312970 LOC102725191A0A1B0GVB3 256 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 LOC390937A0A1W2PQ73 354 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 B9A039 149 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 SLC43A1O75387 559 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 PDE5AO76074 875 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 LY6HO94772 140 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 ZNF432O94892 652 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 TGDSO95455 350 aa7.08□□□□□ -1.28
TPM3-203ENST00000312970 IGHV4-31P0DP07 118 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms