RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PRAMEF14Q5SWL7 426 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 LRRTM1Q86UE6 522 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 HAVCR1Q96D42 359 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 ARSGQ96EG1 525 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 HS6ST2Q96MM7 605 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 CMC2Q9NRP2 79 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 PMS2P1A4D2B8 440 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 DLSTP36957 453 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 MESP2Q0VG99 397 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 PEA15Q15121 130 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 SHHQ15465 462 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 LY6G6FQ5SQ64 297 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 GTPBP8Q8N3Z3 284 aaPredicted RBP16.54■□□□□ 0.24
SPSB4-201ENST00000310546 RAD51AP1Q96B01 352 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 SPSB2Q99619 263 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 POFUT1Q9H488 388 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 MRPS30Q9NP92 439 aaKnown RBP16.54■□□□□ 0.24
SPSB4-201ENST00000310546 C2orf42Q9NWW7 574 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 RPH3AQ9Y2J0 694 aaPredicted RBP16.54■□□□□ 0.24
SPSB4-201ENST00000310546 SPTBP11277 2137 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 TRAV27A0A087WT01 109 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 PNLIPRP2P54317 469 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 GLT8D1Q68CQ7 371 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 C3orf33Q6P1S2 294 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 FIP1L1Q6UN15 594 aaKnown RBP16.54■□□□□ 0.24
SPSB4-201ENST00000310546 LNX2Q8N448 690 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 OR13C2Q8NGS9 318 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 OR4C6Q8NH72 309 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 CNTNAP3BQ96NU0 1288 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 LRRC3BQ96PB8 259 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 APMAPQ9HDC9 416 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 LHX9Q9NQ69 397 aa16.54■□□□□ 0.24
SPSB4-201ENST00000310546 A0A1W2PS29 197 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 C5orf52A6NGY3 159 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 CCSO14618 274 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 ANXA2P07355 339 aaKnown RBP16.53■□□□□ 0.24
SPSB4-201ENST00000310546 RAB40ALP0C0E4 278 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 TAS2R38P59533 333 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 ST8SIA6P61647 398 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 GUCA2AQ02747 115 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 FABP9Q0Z7S8 132 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 PLA2G7Q13093 441 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 C9orf64Q5T6V5 341 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 MAMSTRQ6ZN01 415 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 NUDT13Q86X67 352 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 STEAP2Q8NFT2 490 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 OR6N1Q8NGY5 312 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 RAB40AQ8WXH6 277 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 WDR77Q9BQA1 342 aaPredicted RBP16.53■□□□□ 0.24
SPSB4-201ENST00000310546 KRCC1Q9NPI7 259 aaPredicted RBP16.53■□□□□ 0.24
SPSB4-201ENST00000310546 COMMD9Q9P000 198 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.53■□□□□ 0.24
SPSB4-201ENST00000310546 OGG1O15527 345 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 RAD1O60671 282 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 CAPZA1P52907 286 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 ZNF234Q14588 700 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 HYAL4Q2M3T9 481 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 IER2Q9BTL4 223 aa16.53■□□□□ 0.24
SPSB4-201ENST00000310546 CARHSP1Q9Y2V2 147 aaKnown RBP16.53■□□□□ 0.24
SPSB4-201ENST00000310546 C1orf196B1AJZ1 125 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 IDSB3KWA1 339 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 MAN2B1O00754 1011 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 NTSP30990 170 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 PRLHRP49683 370 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 ACTC1P68032 377 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 ACTA1P68133 377 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 OR7A5Q15622 319 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 C9orf152Q5JTZ5 239 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 ACER2Q5QJU3 275 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 C12orf40Q86WS4 652 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 TRAPPC5Q8IUR0 188 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 SDR9C7Q8NEX9 313 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 OR1J4Q8NGS1 313 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 NR4A3Q92570 626 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 PHYHIPLQ96FC7 376 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 OR7D2Q96RA2 312 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 MS4A8Q9BY19 250 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 TAC3Q9UHF0 121 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 TNFSF18Q9UNG2 199 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 TMEM82A0PJX8 343 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 POM121BA6NF01 834 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 OR2F2O95006 317 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 OR2F1Q13607 317 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 LY6G5CQ5SRR4 150 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 MRM1Q6IN84 353 aaKnown RBP16.52■□□□□ 0.24
SPSB4-201ENST00000310546 MEPEQ9NQ76 525 aaPredicted RBP16.52■□□□□ 0.24
SPSB4-201ENST00000310546 FBXO4Q9UKT5 387 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 FAM96BQ9Y3D0 163 aa16.52■□□□□ 0.24
SPSB4-201ENST00000310546 LAMA1P25391 3075 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 A0A087WV48 116 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 TRAPPC13A5PLN9 417 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 MOSPD3O75425 235 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 CD3DP04234 171 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 ABOP16442 354 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 TCEAL5Q5H9L2 206 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 Q6ZVU0 165 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 NDUFAF7Q7L592 441 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 FAM129CQ86XR2 697 aa16.52■□□□□ 0.23
SPSB4-201ENST00000310546 SKA3Q8IX90 412 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms